Loop id | Source Location | Source Function | Level | Coverage run_0 (%) | Max Time Over Threads run_0 (s) | Time w.r.t. Wall Time run_0 (s) | Nb Threads run_0 | GFLOPS run_0 | Vectorization Ratio (%) | Vector Length Use (%) | Speedup If No Scalar Integer | Speedup If FP Vectorized | Speedup If Fully Vectorized | Speedup If Perfect Load Balancing run_0 | Stride 0 | Stride 1 | Stride n | Stride Unknown | Stride Indirect |
---|
987 | libgromacs_mpi.so.7.0.0 - kernel_outer.h:547-547 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_F_2xmm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 33.55 | 92.12 | 92.12 | 1 | 53.68 | 100 | 94.93 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 2 | 2 |
985 | libgromacs_mpi.so.7.0.0 - kernel_outer.h:565-565 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_F_2xmm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 12.51 | 34.34 | 34.34 | 1 | 55.13 | 100 | 95.28 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 2 | 2 |
994 | libgromacs_mpi.so.7.0.0 - kernel_outer.h:547-547 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_VF_2xmm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 5.06 | 13.9 | 13.9 | 1 | 60.18 | 100 | 96.67 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 2 | 2 |
21809 | libgromacs_mpi.so.7.0.0 - fft5d.cpp:884-886 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | Innermost | 3.51 | 9.63 | 9.63 | 1 | 0.00 | 0 | 12.5 | 1 | 1 | 8 | 1 | 0 | 0 | 0 | 3 | 0 |
21402 | libgromacs_mpi.so.7.0.0 - pme_gather.cpp:76-348 [...] | gather_f_bsplines(gmx_pme_t const*, float const*, bool, PmeAtomComm const*, splinedata_t const*, float) | Outermost | 2.8 | 7.69 | 7.69 | 1 | 22.48 | 54.1 | 40.16 | 2.23 | 1.06 | 1.36 | 1 | NA | NA | NA | NA | NA |
18653 | libgromacs_mpi.so.7.0.0 - lincs.cpp:276-287 [...] | _INTERNAL1bba7552::gmx::lincs_matrix_expand(_INTERNAL1bba7552::gmx::Lincs const&, _INTERNAL1bba7552::gmx::Task const&, _INTERNAL1bba7552::gmx::ArrayRef<float const>, _INTERNAL1bba7552::gmx::ArrayRef<float>, _INTERNAL1bba7552::gmx::Array... | InBetween | 2.62 | 7.18 | 7.18 | 1 | 6.34 | 40 | 39.29 | 2.49 | 1.01 | 1.27 | 1 | NA | NA | NA | NA | NA |
21753 | libgromacs_mpi.so.7.0.0 - pme_spread.cpp:331-400 [...] | _INTERNALae0e43be::spread_coefficients_bsplines_thread(pmegrid_t const*, PmeAtomComm const*, splinedata_t*, pme_spline_work*) | Outermost | 2.52 | 6.92 | 6.92 | 1 | 5.63 | 55.67 | 18.81 | 2.2 | 1.6 | 9.11 | 1 | NA | NA | NA | NA | NA |
21746 | libgromacs_mpi.so.7.0.0 - pme_spread.cpp:277-292 [...] | _INTERNALae0e43be::make_bsplines(float**, float**, int, float (*) [3], int, int const*, float const*, bool) | Outermost | 2.39 | 6.55 | 6.55 | 1 | 5.31 | 18.18 | 9.64 | 1.11 | 1.07 | 11.98 | 1 | NA | NA | NA | NA | NA |
21401 | libgromacs_mpi.so.7.0.0 - impl_x86_avx_512_util_float.h:493-493 [...] | gather_f_bsplines(gmx_pme_t const*, float const*, bool, PmeAtomComm const*, splinedata_t const*, float) | Innermost | 1.95 | 5.36 | 5.36 | 1 | 13.15 | 91.67 | 85.94 | 1 | 1 | 1.04 | 1 | 0 | 2 | 0 | 1 | 0 |
992 | libgromacs_mpi.so.7.0.0 - kernel_outer.h:565-565 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_VF_2xmm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 1.92 | 5.26 | 5.26 | 1 | 64.21 | 100 | 97.02 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 2 | 2 |
988 | libgromacs_mpi.so.7.0.0 - kernel_outer.h:541-544 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_F_2xmm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 1.51 | 4.15 | 4.15 | 1 | 43.16 | 97.68 | 93.06 | 1.01 | 1 | 1 | 1 | 3 | 1 | 0 | 3 | 2 |
982 | libgromacs_mpi.so.7.0.0 - stl_iterator.h:1107-1240 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_F_2xmm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Outermost | 1.27 | 3.49 | 3.49 | 1 | 22.76 | 74.16 | 68.07 | 1.47 | 1.02 | 1.31 | 1 | NA | NA | NA | NA | NA |
986 | libgromacs_mpi.so.7.0.0 - kernel_outer.h:559-562 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_F_2xmm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 1.26 | 3.46 | 3.46 | 1 | 47.82 | 98.4 | 94 | 1.01 | 1 | 1 | 1 | 3 | 0 | 1 | 3 | 2 |
983 | libgromacs_mpi.so.7.0.0 - kernel_outer.h:581-581 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_F_2xmm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 1.15 | 3.15 | 3.15 | 1 | 40.43 | 100 | 91.03 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 1 |
21816 | libgromacs_mpi.so.7.0.0 - fft5d.cpp:947-949 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | Innermost | 1.05 | 2.88 | 2.88 | 1 | 0.00 | 33.33 | 16.67 | 1.5 | 1 | 7.2 | 1 | 0 | 1 | 0 | 2 | 0 |
18654 | libgromacs_mpi.so.7.0.0 - lincs.cpp:282-284 | _INTERNAL1bba7552::gmx::lincs_matrix_expand(_INTERNAL1bba7552::gmx::Lincs const&, _INTERNAL1bba7552::gmx::Task const&, _INTERNAL1bba7552::gmx::ArrayRef<float const>, _INTERNAL1bba7552::gmx::ArrayRef<float>, _INTERNAL1bba7552::gmx::Array... | Innermost | 0.92 | 2.53 | 2.53 | 1 | 8.30 | 100 | 100 | 1 | 1 | 1 | 1 | 0 | 2 | 0 | 0 | 1 |
21729 | libgromacs_mpi.so.7.0.0 - pme_spread.cpp:104-133 [...] | _INTERNALae0e43be::calc_interpolation_idx(gmx_pme_t const*, PmeAtomComm*, int, int, int, int) | Single | 0.9 | 2.48 | 2.48 | 1 | 2.40 | 12.12 | 8.52 | 1.06 | 2.13 | 16 | 1 | 0 | 3 | 0 | 0 | 5 |
1497 | libgromacs_mpi.so.7.0.0 - kernel_prune.cpp:109-151 [...] | nbnxn_kernel_prune_2xnn(NbnxnPairlistCpu*, nbnxn_atomdata_t const*, gmx::ArrayRef<gmx::BasicVector<float> const>, float) | Innermost | 0.86 | 2.37 | 2.37 | 1 | 46.58 | 89.47 | 82.24 | 1.14 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 |
18659 | libgromacs_mpi.so.7.0.0 - lincs.cpp:368-383 | _INTERNAL1bba7552::gmx::lincs_update_atoms_noind(int, _INTERNAL1bba7552::gmx::ArrayRef<_INTERNAL1bba7552::gmx::AtomPair const>, float, _INTERNAL1bba7552::gmx::ArrayRef<float const>, _INTERNAL1bba7552::gmx::ArrayRef<_INTERNAL1bba7552::gmx::Ba... | Single | 0.76 | 2.07 | 2.07 | 1 | 2.00 | 0 | 6.25 | 1.13 | 1.48 | 16 | 1 | 0 | 3 | 0 | 1 | 1 |
2693 | libgromacs_mpi.so.7.0.0 - pairlist_simd_2xmm.h:130-176 [...] | _INTERNALb293ce76::makeClusterListSimd2xnn(Nbnxm::Grid const&, NbnxnPairlistCpu*, int, int, int, bool, float const*, float, float, int*) | Single | 0.69 | 1.89 | 1.89 | 1 | 4.83 | 73.82 | 39.3 | 1.42 | 1.16 | 1.74 | 1 | 3.5 | 1 | 0 | 0.5 | 0 |
21183 | libgromacs_mpi.so.7.0.0 - pairs.cpp:863-935 [...] | void _INTERNAL5738f0d5::do_pairs_simple<gmx::SimdFloat, 16, float const*>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float const*, gmx::ArrayRef<float>, float) | Single | 0.53 | 1.46 | 1.46 | 1 | 4.13 | 25.48 | 28.45 | 1.33 | 1 | 1.3 | 1 | NA | NA | NA | NA | NA |
18662 | libgromacs_mpi.so.7.0.0 - lincs.cpp:798-828 [...] | _INTERNAL1bba7552::gmx::__regcall3__calc_dr_x_xp_simd(int, int, _INTERNAL1bba7552::gmx::ArrayRef<_INTERNAL1bba7552::gmx::AtomPair const>, float const (*) [3], float const (*) [3], float const*, float const*, float const*, float (*) [3], float*, floa... | Single | 0.5 | 1.36 | 1.36 | 1 | 3.06 | 100 | 94.59 | 1 | 1 | 1 | 1 | 2 | 5 | 0 | 1 | 4 |
18646 | libgromacs_mpi.so.7.0.0 - lincs.cpp:1087-1089 [...] | _INTERNAL1bba7552::gmx::do_lincs(_INTERNAL1bba7552::gmx::ArrayRefWithPadding<_INTERNAL1bba7552::gmx::BasicVector<float> const>, _INTERNAL1bba7552::gmx::ArrayRefWithPadding<_INTERNAL1bba7552::gmx::BasicVector<float> >, float const (*... | Innermost | 0.46 | 1.27 | 1.27 | 1 | 1.39 | 0 | 6.25 | 1.06 | 1.2 | 16 | 1 | 1 | 3 | 0 | 1 | 0 |
2671 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:2966-3474 [...] | void _INTERNALb293ce76::nbnxn_make_pairlist_part<NbnxnPairlistCpu>(Nbnxm::GridSet const&, Nbnxm::Grid const&, Nbnxm::Grid const&, PairsearchWork*, nbnxn_atomdata_t const*, gmx::ListOfLists<int> const&, float, PairlistType, int, ... | InBetween | 0.39 | 1.06 | 1.06 | 1 | 0.85 | 3.41 | 7.24 | 1.83 | 2.58 | 15.6 | 1 | NA | NA | NA | NA | NA |
20843 | libgromacs_mpi.so.7.0.0 - bonded.cpp:1151-1255 [...] | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type _INTERNALc075c6e4::(anonymous namespace)::angles<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc co... | Single | 0.38 | 1.06 | 1.05 | 1 | 12.19 | 47.27 | 50.67 | 2.13 | 1 | 1.45 | 1 | NA | NA | NA | NA | NA |
2672 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:3407-3411 [...] | void _INTERNALb293ce76::nbnxn_make_pairlist_part<NbnxnPairlistCpu>(Nbnxm::GridSet const&, Nbnxm::Grid const&, Nbnxm::Grid const&, PairsearchWork*, nbnxn_atomdata_t const*, gmx::ListOfLists<int> const&, float, PairlistType, int, ... | Innermost | 0.37 | 1.01 | 1.01 | 1 | 0.16 | 0 | 6.25 | 1.21 | 1.28 | 16 | 1 | 0 | 0 | 1 | 0 | 0 |
19336 | libgromacs_mpi.so.7.0.0 - update.cpp:481-481 [...] | std::enable_if<std::is_same<float [3], float [3]>::value||std::is_same<float [3], float const [3]>::value, void>::type _INTERNAL568e5334::updateMDLeapfrogSimpleSimd<(StoreUpdatedVelocities)0, float [3]>(int, int, float, gmx::ArrayRe... | Single | 0.36 | 0.98 | 0.97 | 1 | 4.45 | 100 | 100 | 1.03 | 1 | 1 | 1 | 0 | 5 | 0 | 0 | 0 |
21179 | libgromacs_mpi.so.7.0.0 - pairs.cpp:125-824 [...] | float _INTERNAL5738f0d5::do_pairs_general<(BondedKernelFlavor)2>(int, int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float const*, float*, gmx::ArrayRef<float>, gmx::ArrayRef<float>, gm... | Single | 0.33 | 0.91 | 0.91 | 1 | 1.22 | 6.25 | 8.11 | 1.7 | 1.65 | 19.78 | 1 | NA | NA | NA | NA | NA |
17834 | libgromacs_mpi.so.7.0.0 - calc_verletbuf.cpp:530-721 [...] | _INTERNALc226143a::energyDrift(gmx::ArrayRef<VerletbufAtomtype const>, gmx_ffparams_t const*, float, pot_derivatives_t const*, pot_derivatives_t const*, pot_derivatives_t const*, float, float, float, float) | Innermost | 0.31 | 0.86 | 0.86 | 1 | 1.72 | 6.83 | 9.1 | 1 | 1.77 | 2.42 | 1 | NA | NA | NA | NA | NA |
1588 | libgromacs_mpi.so.7.0.0 - atomdata.cpp:1173-1179 [...] | _INTERNALa817b2b7::nbnxn_atomdata_add_nbat_f_to_f_part(Nbnxm::GridSet const&, nbnxn_atomdata_t const&, nbnxn_atomdata_output_t const&, int, int, float (*) [3]) | Single | 0.3 | 0.81 | 0.81 | 1 | 1.05 | 0 | 6.25 | 1.47 | 1.57 | 16 | 1 | 0 | 2 | 0 | 1 | 0 |
20945 | libgromacs_mpi.so.7.0.0 - bonded.cpp:129-2014 [...] | std::enable_if<(((BondedKernelFlavor)2)!=((BondedKernelFlavor)0))||(!(1)), float>::type _INTERNALc075c6e4::(anonymous namespace)::pdihs<(BondedKernelFlavor)2>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3],... | Outermost | 0.28 | 0.78 | 0.78 | 1 | 1.87 | 2.87 | 7.48 | 1.29 | 1.18 | 14.29 | 1 | NA | NA | NA | NA | NA |
1580 | libgromacs_mpi.so.7.0.0 - atomdata.cpp:226-236 | copy_rvec_to_nbat_real(int const*, int, int, float const (*) [3], int, float*, int) | Single | 0.27 | 0.75 | 0.75 | 1 | 0.00 | 0 | 6.25 | 1 | 1 | 16 | 1 | 0 | 1 | 6 | 0 | 0 |
20856 | libgromacs_mpi.so.7.0.0 - bonded.cpp:2059-2126 [...] | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type _INTERNALc075c6e4::(anonymous namespace)::pdihs<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc con... | Single | 0.25 | 0.7 | 0.7 | 1 | 3.20 | 17.06 | 15.42 | 2.53 | 1 | 2.37 | 1 | NA | NA | NA | NA | NA |
995 | libgromacs_mpi.so.7.0.0 - kernel_outer.h:541-544 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_VF_2xmm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 0.21 | 0.59 | 0.59 | 1 | 44.88 | 98.88 | 95.81 | 1.01 | 1 | 1 | 1 | 3 | 0 | 1 | 3 | 2 |
993 | libgromacs_mpi.so.7.0.0 - kernel_outer.h:559-562 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_VF_2xmm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 0.2 | 0.56 | 0.56 | 1 | 50.71 | 99.01 | 96.28 | 1.01 | 1 | 1 | 1 | 3 | 0 | 1 | 3 | 2 |
19339 | libgromacs_mpi.so.7.0.0 - update.cpp:1638-1641 | L__ZN3gmx6Update4Impl13finish_updateERK10t_inputrecbiNS_8ArrayRefIKtEEP7t_stateP13gmx_wallcycleb_1637__par_region0_2_148 | Single | 0.2 | 0.55 | 0.55 | 1 | 0.00 | 0 | 6.25 | 1 | 1 | 16 | 1 | 0 | 2 | 0 | 0 | 0 |
2123 | libgromacs_mpi.so.7.0.0 - iterator_interface.hpp:459-459 [...] | clearForceBuffer(nbnxn_atomdata_t*, int) | Single | 0.19 | 0.53 | 0.53 | 1 | 0.00 | 0 | 9.38 | 1 | 1 | 11 | 1 | 0 | 1 | 0 | 0 | 0 |
21637 | libgromacs_mpi.so.7.0.0 - pme_solve.cpp:98-561 [...] | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Outermost | 0.19 | 0.52 | 0.52 | 1 | 20.15 | 46.08 | 48.27 | 2.78 | 1.03 | 1.38 | 1 | NA | NA | NA | NA | NA |
5128 | libgromacs_mpi.so.7.0.0 - threaded_force_buffer.cpp:200-200 [...] | L__ZN17_INTERNALd056bbd43gmx12_GLOBAL__N_124reduceThreadForceBuffersIA4_fEEvNS0_8ArrayRefINS0_11BasicVectorIfEEEENS4_ISt10unique_ptrINS0_17ThreadForceBufferIT_EESt14default_deleteISB_EEEENS4_IKSt5arrayImLm2EEEENS4_IKiEE_170__par_region0_2_127 | Innermost | 0.18 | 0.49 | 0.49 | 1 | 0.94 | 0 | 6.25 | 1.33 | 1.67 | 16 | 1 | 0 | 0 | 4 | 0 | 0 |
989 | libgromacs_mpi.so.7.0.0 - stl_iterator.h:1107-1240 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_VF_2xmm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Outermost | 0.18 | 0.5 | 0.5 | 1 | 37.12 | 69.34 | 64.45 | 1.45 | 1.03 | 1.35 | 1 | NA | NA | NA | NA | NA |
19100 | libgromacs_mpi.so.7.0.0 - settle.cpp:423-649 [...] | void _INTERNAL4f3e572d::gmx::settleTemplate<_INTERNAL4f3e572d::gmx::SimdFloat, _INTERNAL4f3e572d::gmx::SimdFBool, 16, float const*, true, false>(_INTERNAL4f3e572d::gmx::SettleData const&, int, int, float const*, float const*, float*, float, float... | Single | 0.18 | 0.48 | 0.48 | 1 | 36.00 | 99.02 | 98.9 | 1.08 | 1 | 1 | 1 | 3 | 0 | 0 | 2 | 0 |
19162 | libgromacs_mpi.so.7.0.0 - iterator_interface.hpp:459-459 [...] | _INTERNALc6865387::setupForceOutputs(ForceHelperBuffers*, gmx::ArrayRefWithPadding<gmx::BasicVector<float> >, gmx::DomainLifetimeWorkload const&, gmx::StepWorkload const&, bool, gmx_wallcycle*) | Single | 0.18 | 0.49 | 0.49 | 1 | 0.00 | 0 | 9.67 | 1 | 1 | 13.59 | 1 | 0 | 1 | 0 | 0 | 0 |
18774 | libgromacs_mpi.so.7.0.0 - md_support.cpp:139-157 [...] | L__ZN17_INTERNAL727fa8dd19calc_ke_part_normalEN3gmx8ArrayRefIKNS0_11BasicVectorIfEEEEPK9t_grpoptsPK9t_mdatomsP14gmx_ekindata_tP6t_nrnbb_113__par_region0_2_11 | Innermost | 0.17 | 0.45 | 0.45 | 1 | 3.44 | 1.75 | 7.04 | 1.17 | 1.42 | 18.46 | 1 | NA | NA | NA | NA | NA |
990 | libgromacs_mpi.so.7.0.0 - kernel_outer.h:581-581 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_VF_2xmm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 0.16 | 0.45 | 0.45 | 1 | 45.69 | 100 | 93.58 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 2 | 1 |
2692 | libgromacs_mpi.so.7.0.0 - pairlist_simd_2xmm.h:185-231 [...] | _INTERNALb293ce76::makeClusterListSimd2xnn(Nbnxm::Grid const&, NbnxnPairlistCpu*, int, int, int, bool, float const*, float, float, int*) | Single | 0.16 | 0.44 | 0.44 | 1 | 7.18 | 74.85 | 39.03 | 1.32 | 1.16 | 1.76 | 1 | 3.5 | 0 | 0 | 0.5 | 1 |
18657 | libgromacs_mpi.so.7.0.0 - lincs.cpp:919-930 [...] | _INTERNAL1bba7552::gmx::__regcall3__calc_dist_iter_simd(int, int, _INTERNAL1bba7552::gmx::ArrayRef<_INTERNAL1bba7552::gmx::AtomPair const>, float const (*) [3], float const*, float const*, float const*, float, float*, float*, bool*) | Single | 0.15 | 0.42 | 0.42 | 1 | 7.62 | 100 | 92.37 | 1 | 1 | 1 | 1 | 1 | 5 | 0 | 0 | 2 |
21813 | libgromacs_mpi.so.7.0.0 - fft5d.cpp:899-1382 [...] | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | InBetween | 0.15 | 0.4 | 0.4 | 1 | 0.00 | 0 | 7.5 | 1 | 1 | 15.69 | 1 | NA | NA | NA | NA | NA |
20932 | libgromacs_mpi.so.7.0.0 - bonded.cpp:445-1084 [...] | std::enable_if<(((BondedKernelFlavor)2)!=((BondedKernelFlavor)0))||(!(1)), float>::type _INTERNALc075c6e4::(anonymous namespace)::angles<(BondedKernelFlavor)2>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3]... | Single | 0.15 | 0.42 | 0.42 | 1 | 3.17 | 6.4 | 8.37 | 1.06 | 2.29 | 14.23 | 1 | 2 | 0.5 | 1 | 5 | 0 |
21806 | libgromacs_mpi.so.7.0.0 - fft5d.cpp:835-886 [...] | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | InBetween | 0.14 | 0.38 | 0.38 | 1 | 0.00 | 0 | 8.61 | 1 | 1 | 14.87 | 1 | NA | NA | NA | NA | NA |
984 | libgromacs_mpi.so.7.0.0 - kernel_outer.h:575-578 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_F_2xmm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 0.13 | 0.36 | 0.35 | 1 | 40.23 | 98.82 | 90.66 | 1.03 | 1 | 1 | 1 | 3 | 0 | 2 | 2 | 1 |
21643 | libgromacs_mpi.so.7.0.0 - pme_solve.cpp:234-238 [...] | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.09 | 0.24 | 0.24 | 1 | 34.00 | 100 | 100 | 1.2 | 1 | 1 | 1 | 2 | 3 | 0 | 0 | 0 |
2691 | libgromacs_mpi.so.7.0.0 - pairlist_simd_2xmm.h:237-242 [...] | _INTERNALb293ce76::makeClusterListSimd2xnn(Nbnxm::Grid const&, NbnxnPairlistCpu*, int, int, int, bool, float const*, float, float, int*) | Single | 0.08 | 0.22 | 0.22 | 1 | 8.00 | 5.88 | 8.82 | 1 | 1 | 13.62 | 1 | NA | NA | NA | NA | NA |
21660 | libgromacs_mpi.so.7.0.0 - pme_solve.cpp:441-454 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.08 | 0.22 | 0.23 | 1 | 3.96 | 14.29 | 8.93 | 1.04 | 1.04 | 14.22 | 1 | 1 | 7 | 0 | 0 | 0 |
2703 | libgromacs_mpi.so.7.0.0 - iterator_interface.hpp:459-459 [...] | _INTERNALb293ce76::setExclusionsForIEntry(Nbnxm::GridSet const&, NbnxnPairlistCpu*, bool, int, nbnxn_ci_t const&, gmx::ListOfLists<int> const&) | InBetween | 0.07 | 0.2 | 0.2 | 1 | 0.00 | 0 | 7.35 | 1 | 1 | 15.02 | 1 | NA | NA | NA | NA | NA |
18643 | libgromacs_mpi.so.7.0.0 - lincs.cpp:1155-1155 [...] | _INTERNAL1bba7552::gmx::do_lincs(_INTERNAL1bba7552::gmx::ArrayRefWithPadding<_INTERNAL1bba7552::gmx::BasicVector<float> const>, _INTERNAL1bba7552::gmx::ArrayRefWithPadding<_INTERNAL1bba7552::gmx::BasicVector<float> >, float const (*... | Innermost | 0.07 | 0.18 | 0.18 | 1 | 0.89 | 100 | 100 | 1 | 1 | 1 | 1 | 0 | 4 | 0 | 0 | 0 |
21659 | libgromacs_mpi.so.7.0.0 - pme_solve.cpp:457-470 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.07 | 0.19 | 0.19 | 1 | 3.26 | 13.64 | 8.81 | 1.08 | 1.08 | 14.29 | 1 | 1 | 7 | 0 | 0 | 0 |
19308 | libgromacs_mpi.so.7.0.0 - update.cpp:361-387 [...] | _INTERNAL568e5334::do_update_md(int, int, float, long, float const (*) [3], float (*) [3], float (*) [3], float const (*) [3], TemperatureCoupling, PressureCoupling, int, int, gmx::ArrayRef<unsigned short const>, bool, gmx::ArrayRef<unsigned short... | Single | 0.06 | 0.17 | 0.17 | 1 | 2.82 | 0 | 6.25 | 1.12 | 1.42 | 16 | 1 | 0 | 6 | 0 | 1 | 0 |
2673 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:3392-3396 [...] | void _INTERNALb293ce76::nbnxn_make_pairlist_part<NbnxnPairlistCpu>(Nbnxm::GridSet const&, Nbnxm::Grid const&, Nbnxm::Grid const&, PairsearchWork*, nbnxn_atomdata_t const*, gmx::ListOfLists<int> const&, float, PairlistType, int, ... | Innermost | 0.05 | 0.14 | 0.14 | 1 | 0.64 | 0 | 6.25 | 1.29 | 1.33 | 16 | 1 | 0 | 0 | 0 | 0 | 1 |
21639 | libgromacs_mpi.so.7.0.0 - pme_solve.cpp:555-561 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.05 | 0.14 | 0.14 | 1 | 19.43 | 100 | 87.5 | 1 | 1 | 1.1 | 1 | 0 | 2 | 0 | 0 | 0 |
3911 | libgromacs_mpi.so.7.0.0 - iterator_interface.hpp:459-459 [...] | void _INTERNAL80d859f8::make_exclusions_zone<true>(gmx::ArrayRef<int const>, gmx_ga2la_t const&, gmx_domdec_zones_t const&, gmx::ArrayRef<MolblockIndices const>, std::vector<gmx_moltype_t, std::allocator<gmx_moltype_t> &g... | InBetween | 0.04 | 0.11 | 0.11 | 1 | 0.00 | 0 | 8.79 | 1 | 1 | 36.57 | 1 | NA | NA | NA | NA | NA |
21437 | libgromacs_mpi.so.7.0.0 - pme_grid.cpp:395-404 | copy_fftgrid_to_pmegrid(gmx_pme_t*, float const*, float*, int, int, int) | Innermost | 0.04 | 0.12 | 0.12 | 1 | 0.00 | 0 | 8.59 | 1 | 1 | 9.17 | 1 | 1 | 0 | 0 | 0 | 0 |
21644 | libgromacs_mpi.so.7.0.0 - pme_solve.cpp:534-543 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.04 | 0.11 | 0.11 | 1 | 33.45 | 100 | 100 | 1 | 1 | 1 | 1 | 0 | 3 | 0 | 0 | 0 |
2669 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:2223-3507 [...] | void _INTERNALb293ce76::nbnxn_make_pairlist_part<NbnxnPairlistCpu>(Nbnxm::GridSet const&, Nbnxm::Grid const&, Nbnxm::Grid const&, PairsearchWork*, nbnxn_atomdata_t const*, gmx::ListOfLists<int> const&, float, PairlistType, int, ... | InBetween | 0.04 | 0.11 | 0.11 | 1 | 0.09 | 4.82 | 8.13 | 3.08 | 2.08 | 14.5 | 1 | NA | NA | NA | NA | NA |
21783 | libgromacs_mpi.so.7.0.0 - fft.cpp:115-123 | gmx_fft_many_1d(gmx_fft*, gmx_fft_direction, void*, void*) | Single | 0.04 | 0.1 | 0.1 | 1 | 13.60 | 0 | 10 | 1 | 1 | 14.86 | 1 | 1 | 0 | 0 | 0 | 0 |
2680 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:1981-1985 [...] | _INTERNALb293ce76::closeIEntry(NbnxnPairlistCpu*, int, bool, float, int, int) | Single | 0.04 | 0.11 | 0.11 | 1 | 0.00 | 0 | 6.25 | 1 | 1 | 16 | 1 | 0.5 | 1 | 0.5 | 0 | 0 |
21647 | libgromacs_mpi.so.7.0.0 - pme_solve.cpp:522-531 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.04 | 0.11 | 0.11 | 1 | 1.73 | 100 | 100 | 1 | 1 | 1 | 1 | 0 | 3 | 0 | 0 | 0 |
3941 | libgromacs_mpi.so.7.0.0 - localtopology.cpp:416-576 [...] | int _INTERNAL80d859f8::assignInteractionsForAtom<true>(AtomIndexSet const&, reverse_ilist_t const&, gmx_ga2la_t const&, gmx_domdec_zones_t const&, bool, int const*, bool, float, t_pbc const*, gmx::ArrayRef<gmx::BasicVector<float... | Outermost | 0.04 | 0.12 | 0.12 | 1 | 0.00 | 2.92 | 10.46 | 4.45 | 1 | 17.94 | 1 | NA | NA | NA | NA | NA |
21464 | libgromacs_mpi.so.7.0.0 - pme_grid.cpp:496-539 [...] | unwrap_periodic_pmegrid(gmx_pme_t*, float*) | InBetween | 0.03 | 0.09 | 0.09 | 1 | 0.00 | 0 | 6.58 | 1 | 1 | 15.67 | 1 | NA | NA | NA | NA | NA |
17902 | libgromacs_mpi.so.7.0.0 - calcvir.cpp:61-81 [...] | calc_vir(int, float const (*) [3], float const (*) [3], float (*) [3], bool, float const (*) [3]) | Single | 0.03 | 0.09 | 0.09 | 1 | 5.33 | 0 | 6.25 | 1.19 | 2.62 | 16 | 1 | 0.5 | 2 | 0 | 0 | 0 |
1496 | libgromacs_mpi.so.7.0.0 - kernel_prune.cpp:76-158 [...] | nbnxn_kernel_prune_2xnn(NbnxnPairlistCpu*, nbnxn_atomdata_t const*, gmx::ArrayRef<gmx::BasicVector<float> const>, float) | Outermost | 0.03 | 0.09 | 0.09 | 1 | 40.89 | 34.88 | 30.94 | 1.67 | 1 | 1.67 | 1 | 0.5 | 1.5 | 0.5 | 3 | 0.5 |
19099 | libgromacs_mpi.so.7.0.0 - settle.cpp:423-674 [...] | void _INTERNAL4f3e572d::gmx::settleTemplate<_INTERNAL4f3e572d::gmx::SimdFloat, _INTERNAL4f3e572d::gmx::SimdFBool, 16, float const*, true, true>(_INTERNAL4f3e572d::gmx::SettleData const&, int, int, float const*, float const*, float*, float, float*... | Outermost | 0.03 | 0.08 | 0.08 | 1 | 40.00 | 98.75 | 98.67 | 1.08 | 1 | 1 | 1 | 3 | 1 | 0 | 3 | 0 |
2681 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:1991-1995 [...] | _INTERNALb293ce76::closeIEntry(NbnxnPairlistCpu*, int, bool, float, int, int) | Single | 0.03 | 0.09 | 0.09 | 1 | 0.00 | 0 | 6.25 | 1 | 1 | 16 | 1 | 0.5 | 0.5 | 1 | 0 | 0 |
20947 | libgromacs_mpi.so.7.0.0 - bonded.cpp:129-3032 [...] | std::enable_if<(((BondedKernelFlavor)2)!=((BondedKernelFlavor)0))||(!(1)), float>::type _INTERNALc075c6e4::(anonymous namespace)::rbdihs<(BondedKernelFlavor)2>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3]... | Single | 0.03 | 0.09 | 0.09 | 1 | 2.67 | 5.58 | 7.77 | 1.24 | 1.29 | 13.94 | 1 | NA | NA | NA | NA | NA |
21650 | libgromacs_mpi.so.7.0.0 - pme_solve.cpp:499-511 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.03 | 0.08 | 0.08 | 1 | 37.00 | 100 | 91.03 | 1 | 1 | 1.16 | 1 | 1 | 6 | 0 | 0 | 0 |
20860 | libgromacs_mpi.so.7.0.0 - bonded.cpp:1822-2327 [...] | float _INTERNALc075c6e4::(anonymous namespace)::idihs<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float, float*, gmx::ArrayRef<float const>, t_fcdata*, t_disresdata*... | Single | 0.03 | 0.08 | 0.08 | 1 | 2.00 | 4.01 | 8.32 | 1.29 | 1.93 | 13.71 | 1 | 2 | 1 | 1 | 3 | 0 |
21458 | libgromacs_mpi.so.7.0.0 - pme_grid.cpp:440-442 | wrap_periodic_pmegrid(gmx_pme_t const*, float*) | Innermost | 0.03 | 0.09 | 0.09 | 1 | 0.44 | 0 | 6.25 | 1.09 | 1.5 | 16 | 1 | 0 | 2 | 0 | 0 | 0 |
18780 | libgromacs_mpi.so.7.0.0 - mdatoms.cpp:328-497 [...] | atoms2md(gmx_mtop_t const&, t_inputrec const&, int, gmx::ArrayRef<int>, int, gmx::MDAtoms*) | InBetween | 0.03 | 0.09 | 0.09 | 1 | 0.00 | 18.35 | 11.47 | 2.27 | 2.91 | 8.07 | 1 | NA | NA | NA | NA | NA |
2704 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:607-1332 [...] | _INTERNALb293ce76::setExclusionsForIEntry(Nbnxm::GridSet const&, NbnxnPairlistCpu*, bool, int, nbnxn_ci_t const&, gmx::ListOfLists<int> const&) | Innermost | 0.03 | 0.09 | 0.09 | 1 | 0.00 | 0 | 6.25 | 1 | 1 | 16 | 1 | 0 | 0 | 0 | 1 | 0 |
2702 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:607-1420 [...] | _INTERNALb293ce76::setExclusionsForIEntry(Nbnxm::GridSet const&, NbnxnPairlistCpu*, bool, int, nbnxn_ci_t const&, gmx::ListOfLists<int> const&) | Outermost | 0.03 | 0.1 | 0.1 | 1 | 0.00 | 0 | 9.38 | 1 | 1 | 14.44 | 1 | NA | NA | NA | NA | NA |
20857 | libgromacs_mpi.so.7.0.0 - bonded.cpp:2179-2256 [...] | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type _INTERNALc075c6e4::(anonymous namespace)::rbdihs<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc co... | Single | 0.03 | 0.07 | 0.07 | 1 | 2.29 | 12.77 | 15.35 | 2.82 | 1 | 3.11 | 1 | NA | NA | NA | NA | NA |
21808 | libgromacs_mpi.so.7.0.0 - fft5d.cpp:884-886 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | Innermost | 0.03 | 0.09 | 0.09 | 1 | 0.00 | 0 | 12.5 | 1 | 1 | 8 | 1 | 0 | 0 | 0 | 2 | 0 |
20946 | libgromacs_mpi.so.7.0.0 - bonded.cpp:1914-2008 [...] | std::enable_if<(((BondedKernelFlavor)2)!=((BondedKernelFlavor)0))||(!(1)), float>::type _INTERNALc075c6e4::(anonymous namespace)::pdihs<(BondedKernelFlavor)2>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3],... | Innermost | 0.03 | 0.08 | 0.08 | 1 | 0.88 | 7.84 | 8.7 | 1.12 | 1.58 | 13.71 | 1 | 3 | 1 | 0 | 1 | 0 |
21465 | libgromacs_mpi.so.7.0.0 - pme_grid.cpp:537-539 | unwrap_periodic_pmegrid(gmx_pme_t*, float*) | Innermost | 0.03 | 0.07 | 0.07 | 1 | 0.00 | 0 | 6.25 | 1 | 1 | 16 | 1 | 0 | 2 | 0 | 0 | 0 |
21434 | libgromacs_mpi.so.7.0.0 - pme_grid.cpp:301-303 | copy_pmegrid_to_fftgrid(gmx_pme_t const*, float const*, float*, int) | Innermost | 0.03 | 0.08 | 0.08 | 1 | 0.00 | 0 | 8.65 | 1 | 1 | 15 | 1 | 1 | 0 | 0 | 0 | 0 |
2670 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:2966-3474 [...] | void _INTERNALb293ce76::nbnxn_make_pairlist_part<NbnxnPairlistCpu>(Nbnxm::GridSet const&, Nbnxm::Grid const&, Nbnxm::Grid const&, PairsearchWork*, nbnxn_atomdata_t const*, gmx::ListOfLists<int> const&, float, PairlistType, int, ... | InBetween | 0.03 | 0.07 | 0.07 | 1 | 2.57 | 5.26 | 7.4 | 1.56 | 2.1 | 16 | 1 | NA | NA | NA | NA | NA |
18645 | libgromacs_mpi.so.7.0.0 - lincs.cpp:1085-1089 [...] | _INTERNAL1bba7552::gmx::do_lincs(_INTERNAL1bba7552::gmx::ArrayRefWithPadding<_INTERNAL1bba7552::gmx::BasicVector<float> const>, _INTERNAL1bba7552::gmx::ArrayRefWithPadding<_INTERNAL1bba7552::gmx::BasicVector<float> >, float const (*... | Outermost | 0.03 | 0.08 | 0.08 | 1 | 1.38 | 0 | 12.5 | 1 | 1 | 8 | 1 | 0 | 2 | 1 | 0.5 | 0 |
21453 | libgromacs_mpi.so.7.0.0 - pme_grid.cpp:433-442 | wrap_periodic_pmegrid(gmx_pme_t const*, float*) | InBetween | 0.02 | 0.04 | 0.04 | 1 | 0.25 | 0 | 6.25 | 3.17 | 2.3 | 16 | 1 | NA | NA | NA | NA | NA |
21867 | libgromacs_mpi.so.7.0.0 - fft_mkl.cpp:483-506 [...] | gmx_fft_1d_real(gmx_fft*, gmx_fft_direction, void*, void*) | Single | 0.02 | 0.04 | 0.04 | 1 | 16.00 | 0 | 10 | 1 | 1 | 16 | 1 | NA | NA | NA | NA | NA |
1579 | libgromacs_mpi.so.7.0.0 - atomdata.cpp:226-236 | copy_rvec_to_nbat_real(int const*, int, int, float const (*) [3], int, float*, int) | Single | 0.02 | 0.05 | 0.05 | 1 | 0.00 | 0 | 6.25 | 1 | 1 | 16 | 1 | 0 | 1 | 2 | 0 | 0 |
19168 | libgromacs_mpi.so.7.0.0 - sim_util.cpp:150-150 [...] | _INTERNALc6865387::postProcessForces(t_commrec const*, long, t_nrnb*, gmx_wallcycle*, float const (*) [3], gmx::ArrayRef<gmx::BasicVector<float> const>, gmx::ForceOutputs*, float (*) [3], t_mdatoms const*, t_forcerec const*, gmx::VirtualSitesHa... | Single | 0.02 | 0.05 | 0.05 | 1 | 3.00 | 0 | 6.25 | 1.07 | 1.25 | 16 | 1 | 0 | 2 | 0 | 0 | 0 |
991 | libgromacs_mpi.so.7.0.0 - kernel_outer.h:575-578 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_VF_2xmm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 0.02 | 0.06 | 0.06 | 1 | 34.67 | 99.14 | 93.16 | 1 | 1 | 1 | 1 | 3 | 0 | 2 | 2 | 1 |
3907 | libgromacs_mpi.so.7.0.0 - localtopology.cpp:731-787 [...] | void _INTERNAL80d859f8::make_exclusions_zone<true>(gmx::ArrayRef<int const>, gmx_ga2la_t const&, gmx_domdec_zones_t const&, gmx::ArrayRef<MolblockIndices const>, std::vector<gmx_moltype_t, std::allocator<gmx_moltype_t> &g... | InBetween | 0.02 | 0.06 | 0.06 | 1 | 0.00 | 0 | 11.01 | 1 | 1 | 13.74 | 1 | NA | NA | NA | NA | NA |
1991 | libgromacs_mpi.so.7.0.0 - grid.cpp:329-408 [...] | _INTERNAL5ce61142::Nbnxm::sort_atoms(int, bool, int, bool, int*, int, gmx::ArrayRef<gmx::BasicVector<float> const>, float, float, int, gmx::ArrayRef<int>) | Outermost | 0.02 | 0.05 | 0.05 | 1 | 0.40 | 0 | 7.29 | 2.59 | 2.38 | 14.93 | 1 | NA | NA | NA | NA | NA |
3698 | libgromacs_mpi.so.7.0.0 - domdec_constraints.cpp:254-264 [...] | _INTERNAL051658ea::atoms_to_settles(gmx_domdec_t*, gmx_mtop_t const&, gmx::ArrayRef<long const>, gmx::ArrayRef<std::vector<int, std::allocator<int> > const>, int, int, InteractionList*, std::vector<int, std::allocator<int&... | InBetween | 0.02 | 0.05 | 0.05 | 1 | 0.00 | 0 | 7.64 | 1 | 1 | 15 | 1 | NA | NA | NA | NA | NA |
18644 | libgromacs_mpi.so.7.0.0 - lincs.cpp:1098-1098 [...] | _INTERNAL1bba7552::gmx::do_lincs(_INTERNAL1bba7552::gmx::ArrayRefWithPadding<_INTERNAL1bba7552::gmx::BasicVector<float> const>, _INTERNAL1bba7552::gmx::ArrayRefWithPadding<_INTERNAL1bba7552::gmx::BasicVector<float> >, float const (*... | Single | 0.02 | 0.05 | 0.05 | 1 | 3.20 | 100 | 100 | 1 | 1 | 1 | 1 | 0 | 3 | 0 | 0 | 0 |
2682 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:1998-2000 | _INTERNALb293ce76::closeIEntry(NbnxnPairlistCpu*, int, bool, float, int, int) | Single | 0.02 | 0.05 | 0.05 | 1 | 0.00 | 0 | 6.25 | 1 | 1 | 16 | 1 | 0 | 1 | 0 | 1 | 0 |
18666 | libgromacs_mpi.so.7.0.0 - lincs.cpp:1255-1324 [...] | _INTERNAL1bba7552::gmx::set_lincs_matrix_task(_INTERNAL1bba7552::gmx::Lincs*, _INTERNAL1bba7552::gmx::Task*, _INTERNAL1bba7552::gmx::ArrayRef<float const>, int*, int*) | InBetween | 0.02 | 0.05 | 0.05 | 1 | 0.40 | 4.35 | 7.88 | 2.64 | 2.43 | 15.13 | 1 | NA | NA | NA | NA | NA |
3950 | libgromacs_mpi.so.7.0.0 - localtopology.cpp:505-513 [...] | int _INTERNAL80d859f8::assignInteractionsForAtom<true>(AtomIndexSet const&, reverse_ilist_t const&, gmx_ga2la_t const&, gmx_domdec_zones_t const&, bool, int const*, bool, float, t_pbc const*, gmx::ArrayRef<gmx::BasicVector<float... | InBetween | 0.02 | 0.06 | 0.06 | 1 | 0.00 | 0 | 6.25 | 1 | 1 | 16 | 1 | NA | NA | NA | NA | NA |
19160 | libgromacs_mpi.so.7.0.0 - iterator_interface.hpp:459-459 [...] | _INTERNALc6865387::setupForceOutputs(ForceHelperBuffers*, gmx::ArrayRefWithPadding<gmx::BasicVector<float> >, gmx::DomainLifetimeWorkload const&, gmx::StepWorkload const&, bool, gmx_wallcycle*) | Single | 0.02 | 0.06 | 0.06 | 1 | 0.00 | 0 | 9.17 | 1 | 1 | 12.03 | 1 | 0 | 0 | 2 | 0 | 0 |
1994 | libgromacs_mpi.so.7.0.0 - grid.cpp:415-420 | _INTERNAL5ce61142::Nbnxm::sort_atoms(int, bool, int, bool, int*, int, gmx::ArrayRef<gmx::BasicVector<float> const>, float, float, int, gmx::ArrayRef<int>) | Single | 0.02 | 0.05 | 0.05 | 1 | 0.00 | 0 | 6.25 | 1 | 1 | 16 | 1 | 0 | 1 | 0.25 | 0.5 | 0 |
18637 | libgromacs_mpi.so.7.0.0 - lincs.cpp:1215-1223 [...] | _INTERNAL1bba7552::gmx::do_lincs(_INTERNAL1bba7552::gmx::ArrayRefWithPadding<_INTERNAL1bba7552::gmx::BasicVector<float> const>, _INTERNAL1bba7552::gmx::ArrayRefWithPadding<_INTERNAL1bba7552::gmx::BasicVector<float> >, float const (*... | Single | 0.02 | 0.06 | 0.06 | 1 | 4.17 | 4 | 7 | 1.03 | 1.08 | 14.5 | 1 | 2 | 2 | 1 | 0 | 0 |
21784 | libgromacs_mpi.so.7.0.0 - fft.cpp:132-140 | gmx_fft_many_1d_real(gmx_fft*, gmx_fft_direction, void*, void*) | Single | 0.02 | 0.06 | 0.06 | 1 | 26.67 | 0 | 10 | 1 | 1 | 14.86 | 1 | 1 | 0 | 0 | 0 | 0 |
1983 | libgromacs_mpi.so.7.0.0 - grid.cpp:823-834 | _INTERNAL5ce61142::Nbnxm::sort_cluster_on_flag(int, int, int, gmx::ArrayRef<long const>, gmx::ArrayRef<int>, int*) | Innermost | 0.01 | 0.03 | 0.03 | 1 | 0.00 | 0 | 7.74 | 1 | 1 | 14.9 | 1 | 0 | 2 | 0 | 0 | 1 |
5502 | libgromacs_mpi.so.7.0.0 - iterator_interface.hpp:459-459 [...] | _INTERNALd0075a52::mk_grey(gmx::ArrayRef<egCol>, t_graph*, int*, int, float const (*) [3], float const (*) [3], int*) | Outermost | 0.01 | 0.01 | 0.01 | 1 | 1.00 | 11.34 | 8.92 | 2.5 | 1.83 | 22.03 | 1 | NA | NA | NA | NA | NA |
19493 | libgromacs_mpi.so.7.0.0 - vcm.cpp:189-203 [...] | calc_vcm_grp(t_mdatoms const&, gmx::ArrayRef<gmx::BasicVector<float> const>, gmx::ArrayRef<gmx::BasicVector<float> const>, t_vcm*) | Single | 0.01 | 0.02 | 0.02 | 1 | 0.00 | 0 | 6.25 | 1.06 | 1.06 | 16 | 1 | 1 | 2 | 0 | 0 | 0 |
4133 | libgromacs_mpi.so.7.0.0 - stl_algobase.h:383-385 [...] | void _INTERNAL83cfe191::orderVector<gmx::BasicVector<float> >(gmx::ArrayRef<gmx_cgsort const>, gmx::ArrayRef<gmx::BasicVector<float> >, gmx::ArrayRef<gmx::BasicVector<float> >) | Single | 0.01 | 0.02 | 0.02 | 1 | 0.00 | 0 | 6.25 | 1 | 1 | 16 | 1 | 0 | 2 | 0 | 0 | 0 |
4286 | libgromacs_mpi.so.7.0.0 - redistribute.cpp:349-421 [...] | _INTERNAL3b86f157::calc_cg_move(_IO_FILE*, long, gmx_domdec_t*, t_state*, int const*, float (*) [3], float const*, float const*, MoveLimits const&, int, int, gmx::ArrayRef<int>) | InBetween | 0.01 | 0.03 | 0.03 | 1 | 0.00 | 2.02 | 6.83 | 1.81 | 2.06 | 25.36 | 1 | NA | NA | NA | NA | NA |
2005 | libgromacs_mpi.so.7.0.0 - grid.cpp:1241-1311 [...] | Nbnxm::Grid::calcColumnIndices(Nbnxm::Grid::Dimensions const&, gmx::UpdateGroupsCog const*, gmx::Range<int>, gmx::ArrayRef<gmx::BasicVector<float> const>, int, int const*, int, int, gmx::ArrayRef<int>, gmx::ArrayRef<int>) | Single | 0.01 | 0.02 | 0.02 | 1 | 0.50 | 0 | 7.35 | 2.42 | 2.78 | 14.91 | 1 | NA | NA | NA | NA | NA |
2668 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:2223-3507 [...] | void _INTERNALb293ce76::nbnxn_make_pairlist_part<NbnxnPairlistCpu>(Nbnxm::GridSet const&, Nbnxm::Grid const&, Nbnxm::Grid const&, PairsearchWork*, nbnxn_atomdata_t const*, gmx::ListOfLists<int> const&, float, PairlistType, int, ... | InBetween | 0.01 | 0.03 | 0.03 | 1 | 1.00 | 5.88 | 7.54 | 1.46 | 1.56 | 16 | 1 | NA | NA | NA | NA | NA |
5253 | libgromacs_mpi.so.7.0.0 - threaded_force_buffer.cpp:78-80 [...] | gmx::ThreadForceBuffer<float [4]>::clearForcesAndEnergies() | Outermost | 0.01 | 0.04 | 0.04 | 1 | 0.00 | 45.45 | 40.34 | 1.74 | 1 | 1.17 | 1 | NA | NA | NA | NA | NA |
21652 | libgromacs_mpi.so.7.0.0 - pme_solve.cpp:486-496 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.01 | 0.03 | 0.03 | 1 | 16.00 | 100 | 92.11 | 1 | 1 | 1.17 | 1 | 0 | 3 | 0 | 0 | 0 |
19098 | libgromacs_mpi.so.7.0.0 - settle.cpp:661-673 [...] | void _INTERNAL4f3e572d::gmx::settleTemplate<_INTERNAL4f3e572d::gmx::SimdFloat, _INTERNAL4f3e572d::gmx::SimdFBool, 16, float const*, true, true>(_INTERNAL4f3e572d::gmx::SettleData const&, int, int, float const*, float const*, float*, float, float*... | Innermost | 0.01 | 0.01 | 0.01 | 1 | 32.00 | 100 | 100 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 0 |
21121 | libgromacs_mpi.so.7.0.0 - manage_threading.cpp:365-367 [...] | setup_bonded_threading(bonded_threading_t*, int, bool, InteractionDefinitions const&) | Innermost | 0.01 | 0.03 | 0.03 | 1 | 0.00 | 0 | 12.5 | 1 | 1 | 8 | 1 | 0 | 1 | 0 | 0 | 1 |
2665 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:2223-3512 [...] | void _INTERNALb293ce76::nbnxn_make_pairlist_part<NbnxnPairlistCpu>(Nbnxm::GridSet const&, Nbnxm::Grid const&, Nbnxm::Grid const&, PairsearchWork*, nbnxn_atomdata_t const*, gmx::ListOfLists<int> const&, float, PairlistType, int, ... | InBetween | 0.01 | 0.01 | 0.01 | 1 | 0.00 | 3.7 | 8.56 | 2.91 | 2.18 | 14.4 | 1 | NA | NA | NA | NA | NA |
2667 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:2223-3507 [...] | void _INTERNALb293ce76::nbnxn_make_pairlist_part<NbnxnPairlistCpu>(Nbnxm::GridSet const&, Nbnxm::Grid const&, Nbnxm::Grid const&, PairsearchWork*, nbnxn_atomdata_t const*, gmx::ListOfLists<int> const&, float, PairlistType, int, ... | InBetween | 0.01 | 0.01 | 0.01 | 1 | 1.00 | 10.81 | 8.95 | 1.74 | 1.52 | 15.11 | 1 | NA | NA | NA | NA | NA |
2688 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:272-276 | void _INTERNALb293ce76::get_cell_range<0>(float, float, Nbnxm::Grid::Dimensions const&, float, float, int*, int*) | Single | 0.01 | 0.01 | 0.01 | 1 | 0.00 | 20 | 10 | 1 | 2.12 | 16 | 1 | 0 | 0 | 0 | 0 | 0 |
21441 | libgromacs_mpi.so.7.0.0 - pme_grid.cpp:469-471 | wrap_periodic_pmegrid(gmx_pme_t const*, float*) | Innermost | 0.01 | 0.01 | 0.01 | 1 | 0.00 | 100 | 100 | 1 | 1 | 1 | 1 | 0 | 2 | 0 | 0 | 0 |
21817 | libgromacs_mpi.so.7.0.0 - fft5d.cpp:947-949 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | Innermost | 0.01 | 0.02 | 0.02 | 1 | 0.00 | 0 | 12.5 | 1 | 1 | 8 | 1 | 0 | 1 | 0 | 1 | 0 |
21449 | libgromacs_mpi.so.7.0.0 - pme_grid.cpp:453-455 | wrap_periodic_pmegrid(gmx_pme_t const*, float*) | Innermost | 0.01 | 0.01 | 0.01 | 1 | 16.00 | 100 | 100 | 1 | 1 | 1 | 1 | 0 | 2 | 0 | 0 | 0 |
2687 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:281-285 | void _INTERNALb293ce76::get_cell_range<0>(float, float, Nbnxm::Grid::Dimensions const&, float, float, int*, int*) | Single | 0.01 | 0.03 | 0.03 | 1 | 1.00 | 14.29 | 8.93 | 1.08 | 2.97 | 16 | 1 | 2 | 0 | 0 | 0 | 0 |
1951 | libgromacs_mpi.so.7.0.0 - range.h:84-88 [...] | Nbnxm::Grid::setCellIndices(int, int, Nbnxm::GridSetData*, gmx::ArrayRef<Nbnxm::GridWork>, gmx::Range<int>, gmx::ArrayRef<long const>, gmx::ArrayRef<gmx::BasicVector<float> const>, int, nbnxn_atomdata_t*) | Single | 0.01 | 0.01 | 0.01 | 1 | 0.00 | 0 | 6.25 | 1 | 1 | 16 | 1 | 1 | 1 | 0 | 1 | 2 |
3712 | libgromacs_mpi.so.7.0.0 - iterator_interface.hpp:459-459 [...] | _INTERNAL051658ea::atoms_to_constraints(gmx_domdec_t*, gmx_mtop_t const&, gmx::ArrayRef<long const>, gmx::ArrayRef<gmx::ListOfLists<int> const>, int, InteractionList*, std::vector<int, std::allocator<int> >*) | InBetween | 0.01 | 0.04 | 0.04 | 1 | 0.00 | 3.25 | 11.04 | 3.93 | 1 | 10.42 | 1 | NA | NA | NA | NA | NA |
5126 | libgromacs_mpi.so.7.0.0 - threaded_force_buffer.cpp:171-211 [...] | L__ZN17_INTERNALd056bbd43gmx12_GLOBAL__N_124reduceThreadForceBuffersIA4_fEEvNS0_8ArrayRefINS0_11BasicVectorIfEEEENS4_ISt10unique_ptrINS0_17ThreadForceBufferIT_EESt14default_deleteISB_EEEENS4_IKSt5arrayImLm2EEEENS4_IKiEE_170__par_region0_2_127 | Outermost | 0.01 | 0.03 | 0.03 | 1 | 1.33 | 0 | 9.21 | 1 | 1 | 13.61 | 1 | NA | NA | NA | NA | NA |
21812 | libgromacs_mpi.so.7.0.0 - fft5d.cpp:899-1382 [...] | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | InBetween | 0.01 | 0.01 | 0.01 | 1 | 0.00 | 0 | 6.65 | 1 | 1 | 15.41 | 1 | NA | NA | NA | NA | NA |
1569 | libgromacs_mpi.so.7.0.0 - atomdata.cpp:1006-1011 [...] | L__Z31nbnxn_atomdata_copy_x_to_nbat_xRKN5Nbnxm7GridSetEN3gmx12AtomLocalityEPA3_KfP16nbnxn_atomdata_t_993__par_region0_2_45 | Innermost | 0.01 | 0.02 | 0.02 | 1 | 0.00 | 0 | 9.82 | 1 | 1 | 13.71 | 1 | 3 | 2 | 1 | 1 | 3 |
21445 | libgromacs_mpi.so.7.0.0 - pme_grid.cpp:433-451 [...] | wrap_periodic_pmegrid(gmx_pme_t const*, float*) | Outermost | 0.01 | 0.01 | 0.01 | 1 | 0.00 | 0 | 7.19 | 1 | 1 | 14.63 | 1 | NA | NA | NA | NA | NA |
3711 | libgromacs_mpi.so.7.0.0 - domdec_constraints.cpp:314-375 [...] | _INTERNAL051658ea::atoms_to_constraints(gmx_domdec_t*, gmx_mtop_t const&, gmx::ArrayRef<long const>, gmx::ArrayRef<gmx::ListOfLists<int> const>, int, InteractionList*, std::vector<int, std::allocator<int> >*) | Outermost | 0.01 | 0.03 | 0.03 | 1 | 0.00 | 0 | 8.85 | 1 | 1 | 14.38 | 1 | NA | NA | NA | NA | NA |
21815 | libgromacs_mpi.so.7.0.0 - fft5d.cpp:947-949 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | Innermost | 0.01 | 0.02 | 0.02 | 1 | 0.00 | 0 | 12.5 | 1 | 1 | 8 | 1 | 0 | 1 | 0 | 1 | 0 |
3927 | libgromacs_mpi.so.7.0.0 - stl_algo.h:571-583 [...] | _INTERNAL80d859f8::atomInMolblockFromGlobalAtomnr(gmx::ArrayRef<MolblockIndices const>, int) | Single | 0.01 | 0.02 | 0.02 | 1 | 0.00 | 0 | 8.33 | 1 | 1 | 15.3 | 1 | 0 | 0 | 0 | 1 | 0 |
21120 | libgromacs_mpi.so.7.0.0 - manage_threading.cpp:363-367 [...] | setup_bonded_threading(bonded_threading_t*, int, bool, InteractionDefinitions const&) | InBetween | 0.01 | 0.03 | 0.03 | 1 | 0.00 | 0 | 8.16 | 1 | 1 | 14.84 | 1 | 1.33 | 0.67 | 0 | 0.67 | 0 |
4134 | libgromacs_mpi.so.7.0.0 - iterator_interface.hpp:459-459 [...] | void _INTERNAL83cfe191::orderVector<gmx::BasicVector<float> >(gmx::ArrayRef<gmx_cgsort const>, gmx::ArrayRef<gmx::BasicVector<float> >, gmx::ArrayRef<gmx::BasicVector<float> >) | Single | 0.01 | 0.02 | 0.02 | 1 | 0.00 | 0 | 8.24 | 1 | 1 | 15.13 | 1 | 0 | 1 | 2 | 1 | 0 |
128 | gmx_mpi - | __intel_skx_avx512_memset | Single | 0.01 | 0.02 | 0.02 | 1 | 0.00 | 100 | 100 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 0 |
18696 | libgromacs_mpi.so.7.0.0 - iterator_interface.hpp:459-459 [...] | _INTERNAL1bba7552::gmx::set_matrix_indices(_INTERNAL1bba7552::gmx::Lincs*, _INTERNAL1bba7552::gmx::Task const&, _INTERNAL1bba7552::gmx::ListOfLists<int> const&, bool) | Innermost | 0.01 | 0.01 | 0.01 | 1 | 0.00 | 0 | 10.16 | 1 | 1 | 12.68 | 1 | 1 | 1 | 2 | 0 | 0.5 |
20950 | libgromacs_mpi.so.7.0.0 - bonded.cpp:129-2327 [...] | float _INTERNALc075c6e4::(anonymous namespace)::idihs<(BondedKernelFlavor)2>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float, float*, gmx::ArrayRef<float const>, t_fcdata*, t_disresdata*... | Single | 0.01 | 0.02 | 0.02 | 1 | 0.50 | 2.87 | 8.01 | 1.3 | 1.5 | 14.14 | 1 | 2 | 1 | 1 | 5.5 | 0 |
2678 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:281-285 | void _INTERNALb293ce76::get_cell_range<1>(float, float, Nbnxm::Grid::Dimensions const&, float, float, int*, int*) | Single | 0.01 | 0.03 | 0.03 | 1 | 0.33 | 14.29 | 8.93 | 1.08 | 2.97 | 16 | 1 | 2 | 0 | 0 | 0 | 0 |
3942 | libgromacs_mpi.so.7.0.0 - idef.h:245-247 [...] | int _INTERNAL80d859f8::assignInteractionsForAtom<true>(AtomIndexSet const&, reverse_ilist_t const&, gmx_ga2la_t const&, gmx_domdec_zones_t const&, bool, int const*, bool, float, t_pbc const*, gmx::ArrayRef<gmx::BasicVector<float... | Innermost | 0.01 | 0.01 | 0.01 | 1 | 0.00 | 0 | 6.25 | 1 | 1 | 16 | 1 | 1 | 2 | 0 | 0 | 0 |
21655 | libgromacs_mpi.so.7.0.0 - pme_solve.cpp:234-238 [...] | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.01 | 0.01 | 0.01 | 1 | 96.00 | 100 | 100 | 1.2 | 1 | 1 | 1 | 2 | 3 | 0 | 0 | 0 |
3697 | libgromacs_mpi.so.7.0.0 - domdec_constraints.cpp:234-282 [...] | _INTERNAL051658ea::atoms_to_settles(gmx_domdec_t*, gmx_mtop_t const&, gmx::ArrayRef<long const>, gmx::ArrayRef<std::vector<int, std::allocator<int> > const>, int, int, InteractionList*, std::vector<int, std::allocator<int&... | Outermost | 0.01 | 0.03 | 0.03 | 1 | 0.00 | 5.33 | 11.92 | 2.87 | 1 | 13.19 | 1 | NA | NA | NA | NA | NA |
4185 | libgromacs_mpi.so.7.0.0 - partition.cpp:525-533 [...] | _INTERNAL83cfe191::make_dd_indices(gmx_domdec_t*, int) | InBetween | 0.01 | 0.01 | 0.01 | 1 | 0.00 | 4.55 | 10.53 | 1 | 1 | 12.16 | 1 | NA | NA | NA | NA | NA |
21657 | libgromacs_mpi.so.7.0.0 - pme_solve.cpp:473-475 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.01 | 0.01 | 0.01 | 1 | 2.00 | 100 | 100 | 1.17 | 1 | 1 | 1 | 1 | 2 | 0 | 0 | 0 |
3962 | libgromacs_mpi.so.7.0.0 - range.h:84-88 [...] | int _INTERNAL80d859f8::make_bondeds_zone<true>(gmx_reverse_top_t const&, gmx::ArrayRef<int const>, gmx_ga2la_t const&, gmx_domdec_zones_t const&, std::vector<gmx_molblock_t, std::allocator<gmx_molblock_t> > const&, b... | Outermost | 0.01 | 0.02 | 0.02 | 1 | 0.00 | 8.7 | 9.78 | 7.78 | 1 | 11.43 | 1 | NA | NA | NA | NA | NA |
2679 | libgromacs_mpi.so.7.0.0 - pairlist.cpp:272-276 | void _INTERNALb293ce76::get_cell_range<1>(float, float, Nbnxm::Grid::Dimensions const&, float, float, int*, int*) | Single | 0.01 | 0.02 | 0.02 | 1 | 1.50 | 20 | 10 | 1 | 2.12 | 16 | 1 | 0 | 0 | 0 | 0 | 0 |