Loop id | Source Location | Source Function | Level | Exclusive coverage 1x1 (%) | Exclusive coverage 2x1 (%) | Exclusive coverage 4x1 (%) | Exclusive coverage 8x1 (%) | Exclusive coverage 16x1 (%) | Exclusive coverage 32x1 (%) | Exclusive coverage 64x1 (%) | Exclusive coverage 128x1 (%) | Exclusive coverage 192x1 (%) | Inclusive coverage 1x1 (%) | Inclusive coverage 2x1 (%) | Inclusive coverage 4x1 (%) | Inclusive coverage 8x1 (%) | Inclusive coverage 16x1 (%) | Inclusive coverage 32x1 (%) | Inclusive coverage 64x1 (%) | Inclusive coverage 128x1 (%) | Inclusive coverage 192x1 (%) | Max Exclusive Time Over Threads 1x1 (s) | Max Exclusive Time Over Threads 2x1 (s) | Max Exclusive Time Over Threads 4x1 (s) | Max Exclusive Time Over Threads 8x1 (s) | Max Exclusive Time Over Threads 16x1 (s) | Max Exclusive Time Over Threads 32x1 (s) | Max Exclusive Time Over Threads 64x1 (s) | Max Exclusive Time Over Threads 128x1 (s) | Max Exclusive Time Over Threads 192x1 (s) | Max Inclusive Time Over Threads 1x1 (s) | Max Inclusive Time Over Threads 2x1 (s) | Max Inclusive Time Over Threads 4x1 (s) | Max Inclusive Time Over Threads 8x1 (s) | Max Inclusive Time Over Threads 16x1 (s) | Max Inclusive Time Over Threads 32x1 (s) | Max Inclusive Time Over Threads 64x1 (s) | Max Inclusive Time Over Threads 128x1 (s) | Max Inclusive Time Over Threads 192x1 (s) | Exclusive Time w.r.t. Wall Time 1x1 (s) | Exclusive Time w.r.t. Wall Time 2x1 (s) | Exclusive Time w.r.t. Wall Time 4x1 (s) | Exclusive Time w.r.t. Wall Time 8x1 (s) | Exclusive Time w.r.t. Wall Time 16x1 (s) | Exclusive Time w.r.t. Wall Time 32x1 (s) | Exclusive Time w.r.t. Wall Time 64x1 (s) | Exclusive Time w.r.t. Wall Time 128x1 (s) | Exclusive Time w.r.t. Wall Time 192x1 (s) | Inclusive Time w.r.t. Wall Time 1x1 (s) | Inclusive Time w.r.t. Wall Time 2x1 (s) | Inclusive Time w.r.t. Wall Time 4x1 (s) | Inclusive Time w.r.t. Wall Time 8x1 (s) | Inclusive Time w.r.t. Wall Time 16x1 (s) | Inclusive Time w.r.t. Wall Time 32x1 (s) | Inclusive Time w.r.t. Wall Time 64x1 (s) | Inclusive Time w.r.t. Wall Time 128x1 (s) | Inclusive Time w.r.t. Wall Time 192x1 (s) | Nb Threads 1x1 | Nb Threads 2x1 | Nb Threads 4x1 | Nb Threads 8x1 | Nb Threads 16x1 | Nb Threads 32x1 | Nb Threads 64x1 | Nb Threads 128x1 | Nb Threads 192x1 | Vectorization Ratio (%) | Vector Length Use (%) | Speedup If No Scalar Integer | Speedup If FP Vectorized | Speedup If Fully Vectorized | Speedup If Perfect Load Balancing 1x1 | Speedup If Perfect Load Balancing 2x1 | Speedup If Perfect Load Balancing 4x1 | Speedup If Perfect Load Balancing 8x1 | Speedup If Perfect Load Balancing 16x1 | Speedup If Perfect Load Balancing 32x1 | Speedup If Perfect Load Balancing 64x1 | Speedup If Perfect Load Balancing 128x1 | Speedup If Perfect Load Balancing 192x1 | Stride 0 | Stride 1 | Stride n | Stride Unknown | Stride Indirect | (1x1) Efficiency | (1x1) Potential Speed-Up (%) | (2x1) Efficiency | (2x1) Potential Speed-Up (%) | (4x1) Efficiency | (4x1) Potential Speed-Up (%) | (8x1) Efficiency | (8x1) Potential Speed-Up (%) | (16x1) Efficiency | (16x1) Potential Speed-Up (%) | (32x1) Efficiency | (32x1) Potential Speed-Up (%) | (64x1) Efficiency | (64x1) Potential Speed-Up (%) | (128x1) Efficiency | (128x1) Potential Speed-Up (%) | (192x1) Efficiency | (192x1) Potential Speed-Up (%) |
---|
891 | libgromacs_mpi.so.9.0.0 - simd_kernel.h:476-476 [...] | void gmx::nbnxmKernelSimd<(KernelLayout)1, (gmx::KernelCoulombType)1, (VdwCutoffCheck)0, (LJCombinationRule)1, (InteractionModifiers)1, (LJEwald)0, (EnergyOutput)0>(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float c... | Innermost | 37.11 | 35.62 | 35.24 | 33.86 | 31.92 | 24.95 | 24.18 | 17.42 | 15.48 | 37.11 | 35.62 | 35.24 | 33.86 | 31.92 | 24.95 | 24.18 | 17.42 | 15.48 | 297.56 | 167.39 | 107.80 | 65.56 | 34.53 | 28.06 | 17.82 | 6.91 | 4.49 | 297.56 | 167.39 | 107.80 | 65.56 | 34.53 | 28.06 | 17.82 | 6.91 | 4.49 | 297.56 | 155.80 | 84.78 | 50.48 | 23.75 | 12.19 | 7.88 | 2.75 | 1.91 | 297.56 | 155.80 | 84.78 | 50.48 | 23.75 | 12.19 | 7.88 | 2.75 | 1.91 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 128 | 89.44 | 83.62 | 1 | 1 | 1.08 | 1 | 1.07 | 1.27 | 1.3 | 1.45 | 1.44 | 1.42 | 1.67 | 1.58 | 2 | 0 | 1 | 5 | 1 | 1 | 0 | 0.95 | 1.6 | 0.88 | 4.32 | 0.74 | 8.91 | 0.78 | 6.92 | 0.76 | 5.92 | 0.59 | 9.91 | 0.84 | 2.71 | 0.81 | 2.9 |
889 | libgromacs_mpi.so.9.0.0 - simd_kernel.h:497-497 [...] | void gmx::nbnxmKernelSimd<(KernelLayout)1, (gmx::KernelCoulombType)1, (VdwCutoffCheck)0, (LJCombinationRule)1, (InteractionModifiers)1, (LJEwald)0, (EnergyOutput)0>(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float c... | Innermost | 14.12 | 13.64 | 14.04 | 14.13 | 10.91 | 8.40 | 7.46 | 6.06 | 5.51 | 14.12 | 13.64 | 14.04 | 14.13 | 10.91 | 8.40 | 7.46 | 6.06 | 5.51 | 113.23 | 68.98 | 45.74 | 30.41 | 13.91 | 13.88 | 8.35 | 4.56 | 2.92 | 113.23 | 68.98 | 45.74 | 30.41 | 13.91 | 13.88 | 8.35 | 4.56 | 2.92 | 113.23 | 59.64 | 33.77 | 21.07 | 8.12 | 4.10 | 2.43 | 0.96 | 0.68 | 113.23 | 59.64 | 33.77 | 21.07 | 8.12 | 4.10 | 2.43 | 0.96 | 0.68 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 128 | 89.82 | 84.21 | 1 | 1 | 1.05 | 1 | 1.16 | 1.36 | 1.44 | 1.71 | 2.12 | 2.15 | 3.17 | 2.89 | 2 | 0 | 1 | 5 | 1 | 1 | 0 | 0.95 | 0.69 | 0.84 | 2.27 | 0.67 | 4.64 | 0.87 | 1.4 | 0.86 | 1.16 | 0.73 | 2.03 | 0.92 | 0.46 | 0.87 | 0.72 |
898 | libgromacs_mpi.so.9.0.0 - simd_kernel.h:476-476 [...] | void gmx::nbnxmKernelSimd<(KernelLayout)1, (gmx::KernelCoulombType)1, (VdwCutoffCheck)0, (LJCombinationRule)1, (InteractionModifiers)1, (LJEwald)0, (EnergyOutput)1>(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float c... | Innermost | 6.39 | 6.10 | 6.06 | 5.80 | 5.48 | 4.31 | 4.24 | 3.03 | 2.69 | 6.39 | 6.10 | 6.06 | 5.80 | 5.48 | 4.31 | 4.24 | 3.03 | 2.69 | 51.25 | 28.99 | 18.38 | 11.23 | 5.84 | 4.91 | 3.11 | 1.24 | 0.79 | 51.25 | 28.99 | 18.38 | 11.23 | 5.84 | 4.91 | 3.11 | 1.24 | 0.79 | 51.25 | 26.68 | 14.57 | 8.65 | 4.08 | 2.11 | 1.38 | 0.48 | 0.33 | 51.25 | 26.68 | 14.57 | 8.65 | 4.08 | 2.11 | 1.38 | 0.48 | 0.33 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 128 | 88.7 | 84.84 | 1 | 1 | 1.04 | 1 | 1.09 | 1.26 | 1.3 | 1.43 | 1.46 | 1.41 | 1.73 | 1.6 | 2 | 0 | 1 | 2 | 4 | 1 | 0 | 0.96 | 0.24 | 0.88 | 0.73 | 0.74 | 1.51 | 0.79 | 1.18 | 0.76 | 1.03 | 0.58 | 1.78 | 0.84 | 0.5 | 0.81 | 0.52 |
14242 | libgromacs_mpi.so.9.0.0 - calc_verletbuf.cpp:606-849 [...] | energyDrift(gmx::ArrayRef<VerletbufAtomtype const>, gmx_ffparams_t const*, float, pot_derivatives_t const&, pot_derivatives_t const&, pot_derivatives_t const&, float, float, float, int, float) | Innermost | 0.04 | 0.09 | 0.16 | 0.25 | 0.47 | 0.59 | 0.87 | 1.91 | 2.41 | 0.04 | 0.09 | 0.16 | 0.25 | 0.47 | 0.59 | 0.87 | 1.91 | 2.41 | 0.32 | 0.40 | 0.40 | 0.40 | 0.39 | 0.44 | 0.42 | 0.46 | 0.43 | 0.32 | 0.40 | 0.40 | 0.40 | 0.39 | 0.44 | 0.42 | 0.46 | 0.43 | 0.32 | 0.38 | 0.38 | 0.37 | 0.35 | 0.29 | 0.28 | 0.30 | 0.30 | 0.32 | 0.38 | 0.38 | 0.37 | 0.35 | 0.29 | 0.28 | 0.30 | 0.30 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 192 | 10.88 | 9.03 | 1.05 | 1.26 | 5.69 | 1 | 1.05 | 1.08 | 1.08 | 1.11 | 1.53 | 1.5 | 1.57 | 1.48 | 2 | 0 | 1 | 1 | 0 | 1 | 0 | 0.42 | 0.05 | 0.21 | 0.12 | 0.11 | 0.22 | 0.06 | 0.45 | 0.03 | 0.57 | 0.02 | 0.86 | 0.01 | 1.89 | 0.01 | 2.39 |
17268 | libgromacs_mpi.so.9.0.0 - pme_gather.cpp:103-348 [...] | gather_f_bsplines(gmx_pme_t const*, float const*, bool, PmeAtomComm const*, splinedata_t const*, float) | Outermost | 4.40 | 4.24 | 3.58 | 2.93 | 3.03 | 2.18 | 1.61 | 1.74 | 1.52 | 4.40 | 4.24 | 3.58 | 2.93 | 3.03 | 2.18 | 1.61 | 1.74 | 1.52 | 35.29 | 19.51 | 9.33 | 4.85 | 2.57 | 3.12 | 1.62 | 1.13 | 0.81 | 35.29 | 19.51 | 9.33 | 4.85 | 2.57 | 3.12 | 1.62 | 1.13 | 0.81 | 35.29 | 18.53 | 8.61 | 4.37 | 2.26 | 1.07 | 0.53 | 0.28 | 0.19 | 35.29 | 18.53 | 8.61 | 4.37 | 2.26 | 1.07 | 0.53 | 0.28 | 0.19 | 1 | 2 | 4 | 8 | 16 | 12 | 24 | 44 | 64 | 63.64 | 38.76 | 1.31 | 1.07 | 1.4 | 1 | 1.05 | 1.08 | 1.11 | 1.14 | 1.1 | 1.16 | 1.44 | 1.47 | NA | NA | NA | NA | NA | 1 | 0 | 0.95 | 0.2 | 1.02 | 0 | 1.01 | 0 | 0.98 | 0.07 | 1.03 | 0 | 1.05 | 0 | 1 | -0 | 0.98 | 0.02 |
886 | libgromacs_mpi.so.9.0.0 - simd_kernel.h:273-545 [...] | void gmx::nbnxmKernelSimd<(KernelLayout)1, (gmx::KernelCoulombType)1, (VdwCutoffCheck)0, (LJCombinationRule)1, (InteractionModifiers)1, (LJEwald)0, (EnergyOutput)0>(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float c... | Outermost | 0.92 | 0.91 | 0.99 | 1.09 | 1.11 | 0.88 | 0.97 | 1.01 | 1.03 | 56.39 | 54.13 | 54.09 | 52.44 | 47.32 | 36.82 | 34.82 | 26.37 | 23.71 | 7.34 | 4.14 | 2.51 | 1.76 | 0.98 | 0.84 | 0.59 | 0.40 | 0.27 | 452.12 | 239.23 | 133.82 | 80.08 | 37.64 | 30.44 | 19.20 | 7.50 | 4.91 | 7.34 | 3.97 | 2.39 | 1.62 | 0.82 | 0.43 | 0.32 | 0.16 | 0.13 | 452.12 | 236.71 | 130.12 | 78.18 | 35.21 | 17.99 | 11.34 | 4.17 | 2.92 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 128 | 63.83 | 43.88 | 1.21 | 1.03 | 1.47 | 1 | 1.04 | 1.05 | 1.09 | 1.2 | 1.22 | 1.17 | 1.67 | 1.41 | NA | NA | NA | NA | NA | 1 | 0 | 0.92 | 0.07 | 0.77 | 0.23 | 0.57 | 0.47 | 0.56 | 0.49 | 0.53 | 0.41 | 0.36 | 0.62 | 0.36 | 0.65 | 0.3 | 0.72 |
896 | libgromacs_mpi.so.9.0.0 - simd_kernel.h:497-497 [...] | void gmx::nbnxmKernelSimd<(KernelLayout)1, (gmx::KernelCoulombType)1, (VdwCutoffCheck)0, (LJCombinationRule)1, (InteractionModifiers)1, (LJEwald)0, (EnergyOutput)1>(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float c... | Innermost | 2.51 | 2.42 | 2.45 | 2.47 | 1.94 | 1.47 | 1.33 | 1.07 | 0.97 | 2.51 | 2.42 | 2.45 | 2.47 | 1.94 | 1.47 | 1.33 | 1.07 | 0.97 | 20.16 | 12.42 | 7.90 | 5.12 | 2.43 | 2.44 | 1.44 | 0.76 | 0.51 | 20.16 | 12.42 | 7.90 | 5.12 | 2.43 | 2.44 | 1.44 | 0.76 | 0.51 | 20.16 | 10.59 | 5.89 | 3.68 | 1.44 | 0.72 | 0.43 | 0.17 | 0.12 | 20.16 | 10.59 | 5.89 | 3.68 | 1.44 | 0.72 | 0.43 | 0.17 | 0.12 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 127 | 88.93 | 85.47 | 1 | 1 | 1.03 | 1 | 1.17 | 1.34 | 1.39 | 1.68 | 2.12 | 2.08 | 3.03 | 2.86 | 2 | 0 | 1 | 2 | 4 | 1 | 0 | 0.95 | 0.12 | 0.86 | 0.35 | 0.68 | 0.78 | 0.87 | 0.24 | 0.88 | 0.18 | 0.73 | 0.36 | 0.94 | 0.07 | 0.88 | 0.12 |
17552 | libgromacs_mpi.so.9.0.0 - pme_spread.cpp:358-400 [...] | spread_on_grid(gmx_pme_t const*, PmeAtomComm*, pmegrids_t const*, bool, bool, float*, bool, int) [clone .extracted.11] | InBetween | 2.58 | 2.39 | 2.25 | 1.89 | 1.84 | 1.29 | 0.97 | 1.03 | 0.92 | 2.58 | 2.39 | 2.25 | 1.89 | 1.84 | 1.29 | 0.97 | 1.03 | 0.92 | 20.67 | 10.59 | 5.62 | 3.05 | 1.62 | 1.81 | 1.04 | 0.64 | 0.52 | 20.67 | 10.59 | 5.62 | 3.05 | 1.62 | 1.81 | 1.04 | 0.64 | 0.52 | 20.67 | 10.46 | 5.40 | 2.81 | 1.37 | 0.63 | 0.32 | 0.16 | 0.11 | 20.67 | 10.46 | 5.40 | 2.81 | 1.37 | 0.63 | 0.32 | 0.16 | 0.11 | 1 | 2 | 4 | 8 | 16 | 12 | 24 | 44 | 64 | 79.18 | 21.66 | 1.46 | 1.26 | 3.4 | 1 | 1.01 | 1.04 | 1.09 | 1.19 | 1.08 | 1.23 | 1.37 | 1.53 | NA | NA | NA | NA | NA | 1 | 0 | 0.99 | 0.03 | 0.96 | 0.1 | 0.92 | 0.15 | 0.94 | 0.1 | 1.03 | 0 | 1.02 | 0 | 0.99 | 0.01 | 0.95 | 0.05 |
17639 | libgromacs_mpi.so.9.0.0 - fft5d.cpp:787-789 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | Innermost | 0.00 | 0.84 | 0.89 | 0.72 | 0.48 | 0.49 | 0.37 | 0.75 | 0.70 | 0.00 | 0.84 | 0.89 | 0.72 | 0.48 | 0.49 | 0.37 | 0.75 | 0.70 | | 3.82 | 2.26 | 1.21 | 0.42 | 0.73 | 0.39 | 0.44 | 0.37 | | 3.82 | 2.26 | 1.21 | 0.42 | 0.73 | 0.39 | 0.44 | 0.37 | | 3.66 | 2.15 | 1.07 | 0.36 | 0.24 | 0.12 | 0.12 | 0.09 | | 3.66 | 2.15 | 1.07 | 0.36 | 0.24 | 0.12 | 0.12 | 0.09 | | 2 | 4 | 8 | 16 | 12 | 24 | 44 | 64 | 0 | 6.25 | 1 | 1 | 11.73 | 0 | 1.04 | 1.05 | 1.13 | 1.19 | 1.15 | 1.2 | 1.31 | 1.44 | 0 | 0 | 4 | 0 | 0 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
892 | libgromacs_mpi.so.9.0.0 - impl_x86_avx_512_simd_float.h:181-461 [...] | void gmx::nbnxmKernelSimd<(KernelLayout)1, (gmx::KernelCoulombType)1, (VdwCutoffCheck)0, (LJCombinationRule)1, (InteractionModifiers)1, (LJEwald)0, (EnergyOutput)0>(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float c... | Innermost | 1.65 | 1.61 | 1.53 | 1.32 | 1.37 | 1.01 | 0.86 | 0.77 | 0.69 | 1.65 | 1.61 | 1.53 | 1.32 | 1.37 | 1.01 | 0.86 | 0.77 | 0.69 | 13.24 | 7.56 | 4.62 | 2.76 | 1.42 | 1.04 | 0.63 | 0.34 | 0.21 | 13.24 | 7.56 | 4.62 | 2.76 | 1.42 | 1.04 | 0.63 | 0.34 | 0.21 | 13.24 | 7.04 | 3.67 | 1.96 | 1.02 | 0.49 | 0.28 | 0.12 | 0.08 | 13.24 | 7.04 | 3.67 | 1.96 | 1.02 | 0.49 | 0.28 | 0.12 | 0.08 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 128 | 87.39 | 81.79 | 1.01 | 1 | 1.03 | 1 | 1.07 | 1.26 | 1.41 | 1.4 | 1.32 | 1.41 | 1.87 | 1.62 | 2 | 1 | 1 | 3 | 4 | 1 | 0 | 0.94 | 0.1 | 0.9 | 0.15 | 0.84 | 0.21 | 0.81 | 0.26 | 0.84 | 0.16 | 0.74 | 0.22 | 0.85 | 0.11 | 0.81 | 0.13 |
17558 | libgromacs_mpi.so.9.0.0 - pme_spread.cpp:277-975 [...] | spread_on_grid(gmx_pme_t const*, PmeAtomComm*, pmegrids_t const*, bool, bool, float*, bool, int) [clone .extracted.11] | InBetween | 1.50 | 1.39 | 1.48 | 2.27 | 1.14 | 0.73 | 0.57 | 0.59 | 0.52 | 1.50 | 1.39 | 1.48 | 2.27 | 1.14 | 0.73 | 0.57 | 0.59 | 0.52 | 12.01 | 6.27 | 3.91 | 3.69 | 1.07 | 1.11 | 0.69 | 0.38 | 0.30 | 12.01 | 6.27 | 3.91 | 3.69 | 1.07 | 1.11 | 0.69 | 0.38 | 0.30 | 12.01 | 6.06 | 3.57 | 3.39 | 0.85 | 0.36 | 0.19 | 0.09 | 0.06 | 12.01 | 6.06 | 3.57 | 3.39 | 0.85 | 0.36 | 0.19 | 0.09 | 0.06 | 1 | 2 | 4 | 8 | 16 | 12 | 24 | 44 | 64 | 40.78 | 17.2 | 1 | 1.98 | 3.85 | 1 | 1.03 | 1.09 | 1.09 | 1.26 | 1.16 | 1.38 | 1.43 | 1.57 | NA | NA | NA | NA | NA | 1 | 0 | 0.99 | 0.01 | 0.84 | 0.24 | 0.44 | 1.27 | 0.88 | 0.13 | 1.05 | 0 | 1.01 | -0 | 1.01 | 0 | 0.98 | 0.01 |
890 | libgromacs_mpi.so.9.0.0 - impl_x86_avx_512_simd_float.h:181-461 [...] | void gmx::nbnxmKernelSimd<(KernelLayout)1, (gmx::KernelCoulombType)1, (VdwCutoffCheck)0, (LJCombinationRule)1, (InteractionModifiers)1, (LJEwald)0, (EnergyOutput)0>(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float c... | Innermost | 1.40 | 1.25 | 1.26 | 1.22 | 0.98 | 0.71 | 0.62 | 0.57 | 0.52 | 1.40 | 1.25 | 1.26 | 1.22 | 0.98 | 0.71 | 0.62 | 0.57 | 0.52 | 11.20 | 6.27 | 4.14 | 2.60 | 1.42 | 1.17 | 0.77 | 0.41 | 0.35 | 11.20 | 6.27 | 4.14 | 2.60 | 1.42 | 1.17 | 0.77 | 0.41 | 0.35 | 11.20 | 5.48 | 3.03 | 1.81 | 0.73 | 0.35 | 0.20 | 0.09 | 0.06 | 11.20 | 5.48 | 3.03 | 1.81 | 0.73 | 0.35 | 0.20 | 0.09 | 0.06 | 1 | 2 | 4 | 8 | 16 | 20 | 39 | 80 | 120 | 87.98 | 82.64 | 1.01 | 1 | 1.02 | 1 | 1.14 | 1.37 | 1.43 | 1.96 | 2.1 | 2.34 | 2.88 | 3.47 | 2 | 1 | 1 | 3 | 4 | 1 | 0 | 1.02 | 0 | 0.92 | 0.1 | 0.77 | 0.28 | 0.96 | 0.03 | 1 | -0 | 0.87 | 0.08 | 0.97 | 0.02 | 0.92 | 0.04 |
887 | libgromacs_mpi.so.9.0.0 - simd_kernel.h:518-518 [...] | void gmx::nbnxmKernelSimd<(KernelLayout)1, (gmx::KernelCoulombType)1, (VdwCutoffCheck)0, (LJCombinationRule)1, (InteractionModifiers)1, (LJEwald)0, (EnergyOutput)0>(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float c... | Innermost | 1.06 | 0.98 | 0.94 | 0.75 | 0.94 | 0.79 | 0.69 | 0.49 | 0.44 | 1.06 | 0.98 | 0.94 | 0.75 | 0.94 | 0.79 | 0.69 | 0.49 | 0.44 | 8.53 | 4.62 | 3.09 | 1.66 | 3.15 | 3.88 | 2.31 | 1.05 | 0.56 | 8.53 | 4.62 | 3.09 | 1.66 | 3.15 | 3.88 | 2.31 | 1.05 | 0.56 | 8.53 | 4.30 | 2.27 | 1.11 | 0.70 | 0.39 | 0.23 | 0.08 | 0.05 | 8.53 | 4.30 | 2.27 | 1.11 | 0.70 | 0.39 | 0.23 | 0.08 | 0.05 | 1 | 2 | 4 | 8 | 8 | 8 | 16 | 25 | 58 | 96.63 | 85.6 | 1 | 1 | 1.05 | 1 | 1.07 | 1.36 | 1.49 | 2.24 | 2.5 | 2.56 | 2.7 | 3.17 | 2 | 0 | 1 | 3 | 2 | 1 | 0 | 0.99 | 0.01 | 0.94 | 0.06 | 0.96 | 0.03 | 0.76 | 0.23 | 0.69 | 0.25 | 0.59 | 0.28 | 0.87 | 0.06 | 0.82 | 0.08 |
17634 | libgromacs_mpi.so.9.0.0 - fft5d.cpp:853-855 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | Innermost | 1.49 | 1.43 | 0.99 | 0.79 | 0.79 | 0.55 | 0.39 | 2.24 | 0.42 | 1.49 | 1.43 | 0.99 | 0.79 | 0.79 | 0.55 | 0.39 | 2.24 | 0.42 | 11.98 | 6.32 | 2.41 | 1.26 | 0.72 | 0.83 | 0.41 | 1.40 | 0.21 | 11.98 | 6.32 | 2.41 | 1.26 | 0.72 | 0.83 | 0.41 | 1.40 | 0.21 | 11.98 | 6.25 | 2.38 | 1.18 | 0.59 | 0.27 | 0.13 | 0.35 | 0.05 | 11.98 | 6.25 | 2.38 | 1.18 | 0.59 | 0.27 | 0.13 | 0.35 | 0.05 | 1 | 2 | 4 | 8 | 16 | 12 | 24 | 44 | 64 | 0 | 7.95 | 1 | 1 | 9 | 1 | 1.01 | 1.01 | 1.07 | 1.22 | 1.15 | 1.23 | 1.38 | 1.35 | 1 | 0 | 0 | 6 | 0 | 1 | 0 | 0.96 | 0.06 | 1.26 | 0 | 1.27 | 0 | 1.27 | 0 | 1.38 | 0 | 1.48 | 0 | 0.26 | 1.65 | 1.19 | 0 |
16891 | libgromacs_mpi.so.9.0.0 - bonded.cpp:2066-2126 [...] | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type (anonymous namespace)::pdihs<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float, float*,... | Single | 1.05 | 0.99 | 0.86 | 0.72 | 0.70 | 0.53 | 0.41 | 0.44 | 0.40 | 1.05 | 0.99 | 0.86 | 0.72 | 0.70 | 0.53 | 0.41 | 0.44 | 0.40 | 8.41 | 5.32 | 3.02 | 1.64 | 0.98 | 0.88 | 0.50 | 0.44 | 0.31 | 8.41 | 5.32 | 3.02 | 1.64 | 0.98 | 0.88 | 0.50 | 0.44 | 0.31 | 8.41 | 4.34 | 2.07 | 1.08 | 0.52 | 0.26 | 0.13 | 0.07 | 0.05 | 8.41 | 4.34 | 2.07 | 1.08 | 0.52 | 0.26 | 0.13 | 0.07 | 0.05 | 1 | 2 | 4 | 8 | 16 | 20 | 38 | 72 | 106 | 76.42 | 58.47 | 1.12 | 1 | 1.34 | 1 | 1.23 | 1.46 | 1.52 | 1.88 | 2.11 | 2.27 | 3.63 | 3.55 | NA | NA | NA | NA | NA | 1 | 0 | 0.97 | 0.03 | 1.02 | 0 | 0.97 | 0.02 | 1 | -0 | 1.01 | -0 | 0.99 | 0 | 0.95 | 0.02 | 0.89 | 0.05 |
2634 | libgromacs_mpi.so.9.0.0 - simd_prune_kernel.cpp:144-204 [...] | void nbnxmSimdPruneKernel<(KernelLayout)1>(NbnxnPairlistCpu*, nbnxn_atomdata_t const&, gmx::ArrayRef<gmx::BasicVector<float> const>, float) | Innermost | 0.96 | 0.93 | 0.99 | 0.93 | 0.83 | 0.60 | 0.56 | 0.43 | 0.39 | 0.96 | 0.93 | 0.99 | 0.93 | 0.83 | 0.60 | 0.56 | 0.43 | 0.39 | 7.72 | 4.09 | 2.59 | 1.59 | 0.73 | 0.54 | 0.36 | 0.16 | 0.13 | 7.72 | 4.09 | 2.59 | 1.59 | 0.73 | 0.54 | 0.36 | 0.16 | 0.13 | 7.72 | 4.07 | 2.39 | 1.38 | 0.62 | 0.29 | 0.18 | 0.07 | 0.05 | 7.72 | 4.07 | 2.39 | 1.38 | 0.62 | 0.29 | 0.18 | 0.07 | 0.05 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 128 | 89.47 | 82.24 | 1 | 1 | 1.13 | 1 | 1 | 1.08 | 1.16 | 1.19 | 1.15 | 1.25 | 1.62 | 1.81 | 0 | 1 | 0 | 2 | 0 | 1 | 0 | 0.95 | 0.05 | 0.81 | 0.19 | 0.7 | 0.28 | 0.78 | 0.18 | 0.82 | 0.11 | 0.66 | 0.19 | 0.89 | 0.05 | 0.83 | 0.06 |
14999 | libgromacs_mpi.so.9.0.0 - lincs.cpp:290-292 | gmx::lincs_matrix_expand(gmx::Lincs const&, (anonymous namespace)::Task const&, gmx::ArrayRef<float const>, gmx::ArrayRef<float>, gmx::ArrayRef<float>, gmx::ArrayRef<float>) | Innermost | 1.11 | 0.85 | 0.77 | 0.71 | 0.58 | 0.41 | 0.34 | 0.36 | 0.36 | 1.11 | 0.85 | 0.77 | 0.71 | 0.58 | 0.41 | 0.34 | 0.36 | 0.36 | 8.88 | 3.85 | 2.66 | 1.59 | 0.77 | 0.62 | 0.39 | 0.27 | 0.21 | 8.88 | 3.85 | 2.66 | 1.59 | 0.77 | 0.62 | 0.39 | 0.27 | 0.21 | 8.88 | 3.74 | 1.85 | 1.06 | 0.43 | 0.20 | 0.11 | 0.06 | 0.04 | 8.88 | 3.74 | 1.85 | 1.06 | 0.43 | 0.20 | 0.11 | 0.06 | 0.04 | 1 | 2 | 4 | 8 | 16 | 20 | 39 | 75 | 115 | 0 | 6.25 | 1 | 3.37 | 16 | 1 | 1.03 | 1.44 | 1.51 | 1.77 | 1.93 | 2.16 | 2.91 | 2.97 | 0 | 2 | 0 | 0 | 1 | 1 | 0 | 1.19 | 0 | 1.2 | 0 | 1.05 | 0 | 1.28 | 0 | 1.38 | 0 | 1.24 | 0 | 1.23 | 0 | 1.06 | 0 |
17629 | libgromacs_mpi.so.9.0.0 - fft5d.cpp:916-918 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | Innermost | 1.07 | 1.02 | 0.90 | 0.68 | 0.62 | 0.48 | 0.34 | 0.31 | 0.34 | 1.07 | 1.02 | 0.90 | 0.68 | 0.62 | 0.48 | 0.34 | 0.31 | 0.34 | 8.55 | 4.60 | 2.23 | 1.15 | 0.59 | 0.73 | 0.36 | 0.20 | 0.18 | 8.55 | 4.60 | 2.23 | 1.15 | 0.59 | 0.73 | 0.36 | 0.20 | 0.18 | 8.55 | 4.45 | 2.17 | 1.01 | 0.46 | 0.24 | 0.11 | 0.05 | 0.04 | 8.55 | 4.45 | 2.17 | 1.01 | 0.46 | 0.24 | 0.11 | 0.05 | 0.04 | 1 | 2 | 4 | 8 | 16 | 12 | 24 | 44 | 64 | 0 | 6.94 | 1 | 1 | 11.26 | 1 | 1.03 | 1.03 | 1.13 | 1.28 | 1.16 | 1.22 | 1.4 | 1.45 | 1 | 0 | 2 | 3 | 0 | 1 | 0 | 0.96 | 0.04 | 0.99 | 0.01 | 1.06 | 0 | 1.16 | 0 | 1.14 | 0 | 1.21 | 0 | 1.37 | 0 | 1.07 | 0 |
14998 | libgromacs_mpi.so.9.0.0 - lincs.cpp:278-295 [...] | gmx::lincs_matrix_expand(gmx::Lincs const&, (anonymous namespace)::Task const&, gmx::ArrayRef<float const>, gmx::ArrayRef<float>, gmx::ArrayRef<float>, gmx::ArrayRef<float>) | InBetween | 0.63 | 0.52 | 0.55 | 0.48 | 0.46 | 0.33 | 0.29 | 0.33 | 0.32 | 1.74 | 1.38 | 1.32 | 1.19 | 1.04 | 0.74 | 0.63 | 0.69 | 0.68 | 5.06 | 2.50 | 1.61 | 1.00 | 0.71 | 0.57 | 0.31 | 0.25 | 0.17 | 13.94 | 6.35 | 4.28 | 2.59 | 1.44 | 1.19 | 0.69 | 0.53 | 0.36 | 5.06 | 2.28 | 1.32 | 0.72 | 0.34 | 0.16 | 0.09 | 0.05 | 0.04 | 13.94 | 6.02 | 3.17 | 1.78 | 0.78 | 0.36 | 0.21 | 0.11 | 0.08 | 1 | 2 | 4 | 8 | 16 | 20 | 38 | 74 | 110 | 27.93 | 12.92 | 1.78 | 2.81 | 10.67 | 1 | 1.1 | 1.22 | 1.39 | 2.09 | 2.19 | 1.96 | 2.88 | 2.48 | 1 | 0 | 0 | 5 | 0.5 | 1 | 0 | 1.11 | 0 | 0.96 | 0.02 | 0.88 | 0.06 | 0.93 | 0.03 | 0.97 | 0.01 | 0.84 | 0.05 | 0.76 | 0.08 | 0.67 | 0.11 |
15319 | libgromacs_mpi.so.9.0.0 - settle.cpp:425-425 [...] | gmx::csettle(gmx::SettleData const&, int, int, t_pbc const*, gmx::ArrayRefWithPadding<gmx::BasicVector<float> const>, gmx::ArrayRefWithPadding<gmx::BasicVector<float> >, float, gmx::ArrayRefWithPadding<gmx::BasicVector<flo... | Single | 1.17 | 0.94 | 0.87 | 0.72 | 0.61 | 0.44 | 0.34 | 0.39 | 0.32 | 1.17 | 0.94 | 0.87 | 0.72 | 0.61 | 0.44 | 0.34 | 0.39 | 0.32 | 9.37 | 4.33 | 2.77 | 1.49 | 0.66 | 0.46 | 0.32 | 0.23 | 0.12 | 9.37 | 4.33 | 2.77 | 1.49 | 0.66 | 0.46 | 0.32 | 0.23 | 0.12 | 9.37 | 4.10 | 2.10 | 1.07 | 0.45 | 0.21 | 0.11 | 0.06 | 0.04 | 9.37 | 4.10 | 2.10 | 1.07 | 0.45 | 0.21 | 0.11 | 0.06 | 0.04 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 128 | 98.44 | 94.04 | 1.01 | 1 | 1.01 | 1 | 1.06 | 1.32 | 1.4 | 1.46 | 1.35 | 1.81 | 2.43 | 2.13 | 2 | 0 | 3 | 0 | 38 | 1 | 0 | 1.14 | 0 | 1.12 | 0 | 1.1 | 0 | 1.3 | 0 | 1.37 | 0 | 1.32 | 0 | 1.19 | 0 | 1.24 | 0 |
14989 | libgromacs_mpi.so.9.0.0 - lincs.cpp:845-857 [...] | gmx::do_lincs(gmx::ArrayRefWithPadding<gmx::BasicVector<float> const>, gmx::ArrayRefWithPadding<gmx::BasicVector<float> >, float const (*) [3], t_pbc*, gmx::Lincs*, int, gmx::ArrayRef<float const>, t_commrec const*, bool, floa... | Single | 0.55 | 0.52 | 0.52 | 0.53 | 0.43 | 0.32 | 0.27 | 0.29 | 0.31 | 0.55 | 0.52 | 0.52 | 0.53 | 0.43 | 0.32 | 0.27 | 0.29 | 0.31 | 4.41 | 2.40 | 1.59 | 0.99 | 0.62 | 0.51 | 0.33 | 0.20 | 0.17 | 4.41 | 2.40 | 1.59 | 0.99 | 0.62 | 0.51 | 0.33 | 0.20 | 0.17 | 4.41 | 2.26 | 1.26 | 0.80 | 0.32 | 0.16 | 0.09 | 0.05 | 0.04 | 4.41 | 2.26 | 1.26 | 0.80 | 0.32 | 0.16 | 0.09 | 0.05 | 0.04 | 1 | 2 | 4 | 8 | 16 | 19 | 37 | 77 | 110 | 67.79 | 56.38 | 1.04 | 1 | 1.13 | 1 | 1.07 | 1.27 | 1.24 | 1.92 | 1.96 | 2.16 | 2.69 | 2.6 | 2 | 5 | 2 | 0 | 6 | 1 | 0 | 0.98 | 0.01 | 0.88 | 0.06 | 0.69 | 0.16 | 0.85 | 0.06 | 0.89 | 0.04 | 0.78 | 0.06 | 0.74 | 0.08 | 0.61 | 0.12 |
2543 | libgromacs_mpi.so.9.0.0 - pairlist.cpp:162-4066 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.68] | InBetween | 0.41 | 0.52 | 0.60 | 0.62 | 0.72 | 0.58 | 0.62 | 0.29 | 0.31 | 1.61 | 1.72 | 1.76 | 1.75 | 1.74 | 1.34 | 1.27 | 0.84 | 0.83 | 3.30 | 2.32 | 1.52 | 1.06 | 0.66 | 0.63 | 0.46 | 0.11 | 0.12 | 12.88 | 7.73 | 4.46 | 2.73 | 1.49 | 1.27 | 0.91 | 0.26 | 0.23 | 3.30 | 2.30 | 1.44 | 0.93 | 0.53 | 0.29 | 0.20 | 0.05 | 0.04 | 12.88 | 7.53 | 4.23 | 2.60 | 1.29 | 0.66 | 0.41 | 0.13 | 0.10 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 128 | 6.06 | 10.2 | 4.03 | 2.9 | 7.19 | 1 | 1.01 | 1.06 | 1.14 | 1.23 | 1.37 | 1.41 | 1.62 | 2.14 | NA | NA | NA | NA | NA | 1 | 0 | 0.72 | 0.15 | 0.57 | 0.25 | 0.44 | 0.35 | 0.39 | 0.44 | 0.36 | 0.37 | 0.26 | 0.46 | 0.57 | 0.12 | 0.46 | 0.17 |
16882 | libgromacs_mpi.so.9.0.0 - bonded.cpp:1151-1170 [...] | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type (anonymous namespace)::angles<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float, float*... | Single | 1.08 | 0.94 | 0.83 | 0.71 | 0.62 | 0.44 | 0.32 | 0.36 | 0.30 | 1.08 | 0.94 | 0.83 | 0.71 | 0.62 | 0.44 | 0.32 | 0.36 | 0.30 | 8.63 | 4.81 | 2.55 | 1.29 | 0.86 | 0.75 | 0.42 | 0.32 | 0.18 | 8.63 | 4.81 | 2.55 | 1.29 | 0.86 | 0.75 | 0.42 | 0.32 | 0.18 | 8.63 | 4.13 | 2.00 | 1.06 | 0.46 | 0.21 | 0.11 | 0.06 | 0.04 | 8.63 | 4.13 | 2.00 | 1.06 | 0.46 | 0.21 | 0.11 | 0.06 | 0.04 | 1 | 2 | 4 | 8 | 16 | 20 | 37 | 74 | 110 | 79.07 | 48.92 | 1.08 | 1.03 | 1.49 | 1 | 1.17 | 1.28 | 1.22 | 1.86 | 2.19 | 2.32 | 3.3 | 2.85 | NA | NA | NA | NA | NA | 1 | 0 | 1.04 | 0 | 1.08 | 0 | 1.02 | 0 | 1.16 | 0 | 1.26 | 0 | 1.28 | 0 | 1.18 | 0 | 1.2 | 0 |
1375 | libgromacs_mpi.so.9.0.0 - atomdata.cpp:226-233 | copy_rvec_to_nbat_real(int const*, int, int, float const (*) [3], int, float*, int) | Single | 0.19 | 0.25 | 0.30 | 0.56 | 0.37 | 0.24 | 0.23 | 0.27 | 0.30 | 0.19 | 0.25 | 0.30 | 0.56 | 0.37 | 0.24 | 0.23 | 0.27 | 0.30 | 1.56 | 1.12 | 0.74 | 0.93 | 0.44 | 0.28 | 0.19 | 0.10 | 0.10 | 1.56 | 1.12 | 0.74 | 0.93 | 0.44 | 0.28 | 0.19 | 0.10 | 0.10 | 1.56 | 1.07 | 0.72 | 0.84 | 0.28 | 0.12 | 0.08 | 0.04 | 0.04 | 1.56 | 1.07 | 0.72 | 0.84 | 0.28 | 0.12 | 0.08 | 0.04 | 0.04 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 128 | 0 | 6.25 | 1.32 | 1 | 11.38 | 1 | 1.04 | 1.03 | 1.12 | 1.6 | 1.53 | 1.54 | 1.55 | 1.85 | 0 | 1 | 2 | 1 | 1 | 1 | 0 | 0.73 | 0.07 | 0.54 | 0.14 | 0.23 | 0.43 | 0.35 | 0.24 | 0.42 | 0.14 | 0.32 | 0.16 | 0.28 | 0.2 | 0.22 | 0.23 |
1444 | libgromacs_mpi.so.9.0.0 - atomdata.cpp:1137-1143 [...] | reduceForces(nbnxn_atomdata_t*, gmx::AtomLocality, Nbnxm::GridSet const&, float (*) [3]) [clone .extracted] | Innermost | 0.17 | 0.21 | 0.24 | 0.27 | 0.29 | 0.20 | 0.20 | 0.24 | 0.27 | 0.17 | 0.21 | 0.24 | 0.27 | 0.29 | 0.20 | 0.20 | 0.24 | 0.27 | 1.39 | 0.93 | 0.60 | 0.47 | 0.31 | 0.23 | 0.16 | 0.10 | 0.11 | 1.39 | 0.93 | 0.60 | 0.47 | 0.31 | 0.23 | 0.16 | 0.10 | 0.11 | 1.39 | 0.92 | 0.59 | 0.40 | 0.22 | 0.10 | 0.06 | 0.04 | 0.03 | 1.39 | 0.92 | 0.59 | 0.40 | 0.22 | 0.10 | 0.06 | 0.04 | 0.03 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 128 | 0 | 6.25 | 1.11 | 1.1 | 9.41 | 1 | 1.02 | 1.02 | 1.17 | 1.42 | 1.47 | 1.59 | 1.75 | 2.19 | 0 | 2 | 0 | 0 | 1 | 1 | 0 | 0.76 | 0.05 | 0.59 | 0.1 | 0.44 | 0.15 | 0.4 | 0.18 | 0.43 | 0.12 | 0.34 | 0.13 | 0.29 | 0.17 | 0.21 | 0.22 |
17121 | libgromacs_mpi.so.9.0.0 - pairs.cpp:873-894 [...] | void do_pairs_simple<gmx::SimdFloat, 16, float const*>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float const*, gmx::ArrayRef<float const>, float) | Single | 0.76 | 0.73 | 0.68 | 0.56 | 0.50 | 0.34 | 0.25 | 0.28 | 0.25 | 0.76 | 0.73 | 0.68 | 0.56 | 0.50 | 0.34 | 0.25 | 0.28 | 0.25 | 6.09 | 3.61 | 2.31 | 1.28 | 0.65 | 0.65 | 0.31 | 0.27 | 0.18 | 6.09 | 3.61 | 2.31 | 1.28 | 0.65 | 0.65 | 0.31 | 0.27 | 0.18 | 6.09 | 3.19 | 1.64 | 0.84 | 0.37 | 0.17 | 0.08 | 0.04 | 0.03 | 6.09 | 3.19 | 1.64 | 0.84 | 0.37 | 0.17 | 0.08 | 0.04 | 0.03 | 1 | 2 | 4 | 8 | 16 | 20 | 35 | 71 | 107 | 66.13 | 34.75 | 1.16 | 1.04 | 1.6 | 1 | 1.13 | 1.4 | 1.53 | 1.74 | 2.44 | 2.09 | 3.41 | 3.23 | NA | NA | NA | NA | NA | 1 | 0 | 0.95 | 0.03 | 0.93 | 0.05 | 0.91 | 0.05 | 1.02 | 0 | 1.13 | 0 | 1.17 | 0 | 1.06 | 0 | 1.01 | -0 |
15002 | libgromacs_mpi.so.9.0.0 - lincs.cpp:376-391 [...] | gmx::lincs_update_atoms(gmx::Lincs*, int, float, gmx::ArrayRef<float const>, gmx::ArrayRef<gmx::BasicVector<float> const>, gmx::ArrayRef<float const>, float (*) [3]) | Single | 0.55 | 0.50 | 0.51 | 0.44 | 0.37 | 0.25 | 0.21 | 0.25 | 0.24 | 0.55 | 0.50 | 0.51 | 0.44 | 0.37 | 0.25 | 0.21 | 0.25 | 0.24 | 4.37 | 2.39 | 1.55 | 0.90 | 0.62 | 0.48 | 0.27 | 0.21 | 0.16 | 4.37 | 2.39 | 1.55 | 0.90 | 0.62 | 0.48 | 0.27 | 0.21 | 0.16 | 4.37 | 2.19 | 1.22 | 0.65 | 0.28 | 0.12 | 0.07 | 0.04 | 0.03 | 4.37 | 2.19 | 1.22 | 0.65 | 0.28 | 0.12 | 0.07 | 0.04 | 0.03 | 1 | 2 | 4 | 8 | 16 | 20 | 37 | 74 | 105 | 27.78 | 11.11 | 1 | 1.11 | 5 | 1 | 1.09 | 1.27 | 1.38 | 2.23 | 2.43 | 2.28 | 3.07 | 2.97 | 0 | 2 | 1 | 2 | 1 | 1 | 0 | 1 | 0 | 0.89 | 0.05 | 0.84 | 0.07 | 0.98 | 0.01 | 1.11 | 0 | 0.98 | 0 | 0.85 | 0.04 | 0.77 | 0.06 |
17426 | libgromacs_mpi.so.9.0.0 - pme_redistribute.cpp:345-367 [...] | do_redist_pos_coeffs(gmx_pme_t*, t_commrec const*, bool, gmx::ArrayRef<gmx::BasicVector<float> const>, gmx::ArrayRef<float const>) | Innermost | 0.00 | 0.24 | 0.26 | 0.26 | 0.34 | 0.21 | 0.17 | 0.29 | 0.23 | 0.00 | 0.24 | 0.26 | 0.26 | 0.34 | 0.21 | 0.17 | 0.29 | 0.23 | | 1.25 | 0.74 | 0.49 | 0.41 | 0.39 | 0.26 | 0.20 | 0.15 | | 1.25 | 0.74 | 0.49 | 0.41 | 0.39 | 0.26 | 0.20 | 0.15 | | 1.05 | 0.62 | 0.39 | 0.26 | 0.10 | 0.06 | 0.05 | 0.03 | | 1.05 | 0.62 | 0.39 | 0.26 | 0.10 | 0.06 | 0.05 | 0.03 | | 2 | 4 | 8 | 16 | 12 | 24 | 44 | 64 | 0 | 7.13 | 1.45 | 1 | 6.72 | 0 | 1.19 | 1.2 | 1.25 | 1.58 | 1.46 | 1.72 | 1.59 | 1.83 | 2 | 5 | 0.5 | 0 | 0.5 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
2955 | libgromacs_mpi.so.9.0.0 - domdec.cpp:415-419 [...] | dd_move_f(gmx_domdec_t*, gmx::ForceWithShiftForces*, gmx_wallcycle*) | Innermost | 0.00 | 0.04 | 0.09 | 0.31 | 0.17 | 0.10 | 0.12 | 0.15 | 0.19 | 0.00 | 0.04 | 0.09 | 0.31 | 0.17 | 0.10 | 0.12 | 0.15 | 0.19 | | 0.20 | 0.23 | 0.64 | 0.17 | 0.14 | 0.12 | 0.08 | 0.07 | | 0.20 | 0.23 | 0.64 | 0.17 | 0.14 | 0.12 | 0.08 | 0.07 | | 0.17 | 0.21 | 0.46 | 0.13 | 0.05 | 0.04 | 0.02 | 0.02 | | 0.17 | 0.21 | 0.46 | 0.13 | 0.05 | 0.04 | 0.02 | 0.02 | | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 128 | 0 | 6.25 | 1 | 1.08 | 8.42 | 0 | 1.16 | 1.1 | 1.41 | 1.33 | 1.81 | 1.87 | 2.05 | 2.03 | 0 | 2 | 0 | 1 | 0 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
17419 | libgromacs_mpi.so.9.0.0 - pme_redistribute.cpp:455-468 [...] | dd_pmeredist_f(gmx_pme_t*, PmeAtomComm*, gmx::ArrayRef<gmx::BasicVector<float> >, bool) | Single | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.17 | 0.13 | 0.24 | 0.19 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.17 | 0.13 | 0.24 | 0.19 | | | | | | 0.35 | 0.19 | 0.16 | 0.10 | | | | | | 0.35 | 0.19 | 0.16 | 0.10 | | | | | | 0.09 | 0.04 | 0.04 | 0.02 | | | | | | 0.09 | 0.04 | 0.04 | 0.02 | | | | | | 12 | 24 | 44 | 64 | 0 | 6.64 | 1.44 | 1 | 6.69 | 0 | 0 | 0 | 0 | 0 | 1.54 | 1.69 | 1.55 | 1.47 | 1 | 2 | 0 | 1.5 | 1 | | | | | | | | | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
2550 | libgromacs_mpi.so.9.0.0 - pairlist_simd_2xmm.h:130-174 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.68] | Innermost | 0.53 | 0.49 | 0.48 | 0.39 | 0.38 | 0.30 | 0.26 | 0.22 | 0.18 | 0.53 | 0.49 | 0.48 | 0.39 | 0.38 | 0.30 | 0.26 | 0.22 | 0.18 | 4.21 | 2.25 | 1.22 | 0.65 | 0.33 | 0.31 | 0.18 | 0.12 | 0.06 | 4.21 | 2.25 | 1.22 | 0.65 | 0.33 | 0.31 | 0.18 | 0.12 | 0.06 | 4.21 | 2.14 | 1.15 | 0.58 | 0.29 | 0.15 | 0.09 | 0.04 | 0.02 | 4.21 | 2.14 | 1.15 | 0.58 | 0.29 | 0.15 | 0.09 | 0.04 | 0.02 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 128 | 74.01 | 42.1 | 1.08 | 1.22 | 1.6 | 1 | 1.05 | 1.07 | 1.13 | 1.17 | 1.36 | 1.32 | 2.35 | 1.95 | 2.5 | 0 | 1 | 0.5 | 0 | 1 | 0 | 0.98 | 0.01 | 0.92 | 0.04 | 0.91 | 0.03 | 0.92 | 0.03 | 0.91 | 0.03 | 0.77 | 0.06 | 0.93 | 0.02 | 0.98 | 0 |
14982 | libgromacs_mpi.so.9.0.0 - lincs.cpp:966-978 [...] | gmx::do_lincs(gmx::ArrayRefWithPadding<gmx::BasicVector<float> const>, gmx::ArrayRefWithPadding<gmx::BasicVector<float> >, float const (*) [3], t_pbc*, gmx::Lincs*, int, gmx::ArrayRef<float const>, t_commrec const*, bool, floa... | Innermost | 0.25 | 0.26 | 0.25 | 0.22 | 0.21 | 0.17 | 0.13 | 0.17 | 0.16 | 0.25 | 0.26 | 0.25 | 0.22 | 0.21 | 0.17 | 0.13 | 0.17 | 0.16 | 1.97 | 1.20 | 0.70 | 0.48 | 0.28 | 0.31 | 0.16 | 0.15 | 0.09 | 1.97 | 1.20 | 0.70 | 0.48 | 0.28 | 0.31 | 0.16 | 0.15 | 0.09 | 1.97 | 1.12 | 0.59 | 0.33 | 0.16 | 0.08 | 0.04 | 0.03 | 0.02 | 1.97 | 1.12 | 0.59 | 0.33 | 0.16 | 0.08 | 0.04 | 0.03 | 0.02 | 1 | 2 | 4 | 8 | 16 | 20 | 37 | 73 | 106 | 59.17 | 48.8 | 1.06 | 1 | 1.19 | 1 | 1.07 | 1.18 | 1.46 | 1.81 | 2.35 | 2.25 | 3.31 | 2.68 | 0 | 4 | 0 | 0 | 10 | 1 | 0 | 0.88 | 0.03 | 0.83 | 0.04 | 0.75 | 0.06 | 0.79 | 0.04 | 0.74 | 0.04 | 0.72 | 0.04 | 0.59 | 0.07 | 0.52 | 0.08 |
17574 | libgromacs_mpi.so.9.0.0 - pme_spread.cpp:104-133 [...] | spread_on_grid(gmx_pme_t const*, PmeAtomComm*, pmegrids_t const*, bool, bool, float*, bool, int) [clone .extracted.18] | Innermost | 0.43 | 0.37 | 0.37 | 0.45 | 0.33 | 0.23 | 0.17 | 0.19 | 0.16 | 0.43 | 0.37 | 0.37 | 0.45 | 0.33 | 0.23 | 0.17 | 0.19 | 0.16 | 3.46 | 1.69 | 0.99 | 0.81 | 0.35 | 0.34 | 0.22 | 0.15 | 0.10 | 3.46 | 1.69 | 0.99 | 0.81 | 0.35 | 0.34 | 0.22 | 0.15 | 0.10 | 3.46 | 1.61 | 0.89 | 0.68 | 0.25 | 0.11 | 0.06 | 0.03 | 0.02 | 3.46 | 1.61 | 0.89 | 0.68 | 0.25 | 0.11 | 0.06 | 0.03 | 0.02 | 1 | 2 | 4 | 8 | 16 | 12 | 24 | 44 | 64 | 0 | 6.25 | 1.24 | 1.76 | 12.15 | 1 | 1.05 | 1.12 | 1.19 | 1.44 | 1.13 | 1.5 | 1.73 | 1.72 | 1 | 3 | 0 | 0 | 5 | 1 | 0 | 1.07 | 0 | 0.98 | 0.01 | 0.64 | 0.16 | 0.88 | 0.04 | 0.95 | 0.01 | 0.98 | 0 | 0.89 | 0.02 | 0.92 | 0.01 |
2557 | libgromacs_mpi.so.9.0.0 - pairlist.cpp:3503-3505 | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.68] | Innermost | 0.09 | 0.11 | 0.16 | 0.31 | 0.37 | 0.27 | 0.26 | 0.15 | 0.15 | 0.09 | 0.11 | 0.16 | 0.31 | 0.37 | 0.27 | 0.26 | 0.15 | 0.15 | 0.71 | 0.56 | 0.40 | 0.56 | 0.34 | 0.31 | 0.19 | 0.08 | 0.06 | 0.71 | 0.56 | 0.40 | 0.56 | 0.34 | 0.31 | 0.19 | 0.08 | 0.06 | 0.71 | 0.50 | 0.38 | 0.46 | 0.28 | 0.13 | 0.09 | 0.02 | 0.02 | 0.71 | 0.50 | 0.38 | 0.46 | 0.28 | 0.13 | 0.09 | 0.02 | 0.02 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 128 | 0 | 6.25 | 1.11 | 1.46 | 16 | 1 | 1.13 | 1.07 | 1.22 | 1.24 | 1.49 | 1.43 | 2.19 | 2.16 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0.71 | 0.03 | 0.47 | 0.08 | 0.19 | 0.25 | 0.16 | 0.31 | 0.17 | 0.22 | 0.13 | 0.23 | 0.23 | 0.12 | 0.2 | 0.12 |
893 | libgromacs_mpi.so.9.0.0 - simd_kernel.h:273-555 [...] | void gmx::nbnxmKernelSimd<(KernelLayout)1, (gmx::KernelCoulombType)1, (VdwCutoffCheck)0, (LJCombinationRule)1, (InteractionModifiers)1, (LJEwald)0, (EnergyOutput)1>(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float c... | Outermost | 0.13 | 0.16 | 0.16 | 0.17 | 0.20 | 0.14 | 0.15 | 0.16 | 0.15 | 9.70 | 9.32 | 9.27 | 8.99 | 8.16 | 6.35 | 6.06 | 4.56 | 4.08 | 1.02 | 0.73 | 0.42 | 0.28 | 0.18 | 0.17 | 0.11 | 0.08 | 0.05 | 77.74 | 41.29 | 22.78 | 13.71 | 6.41 | 5.23 | 3.32 | 1.34 | 0.88 | 1.02 | 0.69 | 0.39 | 0.25 | 0.15 | 0.07 | 0.05 | 0.03 | 0.02 | 77.74 | 40.78 | 22.29 | 13.40 | 6.07 | 3.10 | 1.97 | 0.72 | 0.50 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 84 | 128 | 66.8 | 50.05 | 1.29 | 1.06 | 1.45 | 1 | 1.06 | 1.09 | 1.13 | 1.27 | 1.6 | 1.44 | 2.13 | 1.98 | NA | NA | NA | NA | NA | 1 | 0 | 0.74 | 0.04 | 0.66 | 0.05 | 0.51 | 0.08 | 0.44 | 0.11 | 0.48 | 0.07 | 0.33 | 0.1 | 0.32 | 0.11 | 0.28 | 0.11 |
17435 | libgromacs_mpi.so.9.0.0 - pme_redistribute.cpp:96-103 | pme_calc_pidx_wrapper(gmx::ArrayRef<gmx::BasicVector<float> const>, float const (*) [3], PmeAtomComm*) [clone .extracted] | Innermost | 0.00 | 0.25 | 0.27 | 0.22 | 0.22 | 0.17 | 0.12 | 0.15 | 0.13 | 0.00 | 0.25 | 0.27 | 0.22 | 0.22 | 0.17 | 0.12 | 0.15 | 0.13 | | 1.17 | 0.78 | 0.48 | 0.26 | 0.34 | 0.23 | 0.13 | 0.11 | | 1.17 | 0.78 | 0.48 | 0.26 | 0.34 | 0.23 | 0.13 | 0.11 | | 1.10 | 0.65 | 0.33 | 0.16 | 0.09 | 0.04 | 0.02 | 0.02 | | 1.10 | 0.65 | 0.33 | 0.16 | 0.09 | 0.04 | 0.02 | 0.02 | | 2 | 4 | 8 | 16 | 12 | 24 | 44 | 64 | 0 | 6.25 | 3 | 1 | 8 | 0 | 1.06 | 1.21 | 1.47 | 1.62 | 1.52 | 2.12 | 1.87 | 2.28 | 0 | 2 | 1 | 0 | 0 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
17437 | libgromacs_mpi.so.9.0.0 - pme_redistribute.cpp:111-118 | pme_calc_pidx_wrapper(gmx::ArrayRef<gmx::BasicVector<float> const>, float const (*) [3], PmeAtomComm*) [clone .extracted] | Innermost | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.13 | 0.13 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.13 | 0.13 | | | | | | | | 0.10 | 0.09 | | | | | | | | 0.10 | 0.09 | | | | | | | | 0.02 | 0.02 | | | | | | | | 0.02 | 0.02 | | | | | | | | 44 | 64 | 0 | 6.25 | 4 | 1 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.69 | 1.98 | 0 | 1 | 2 | 0 | 0 | | | | | | | | | | | | | | | 1 | 0 | 1 | 0 |
17632 | libgromacs_mpi.so.9.0.0 - fft5d.cpp:849-855 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | InBetween | 0.04 | 0.03 | 0.04 | 0.03 | 0.04 | 0.02 | 0.02 | 0.44 | 0.12 | 1.54 | 1.48 | 1.05 | 0.84 | 0.84 | 0.59 | 0.42 | 2.90 | 0.56 | 0.30 | 0.16 | 0.10 | 0.06 | 0.04 | 0.05 | 0.04 | 1.23 | 0.09 | 12.38 | 6.55 | 2.55 | 1.37 | 0.77 | 0.87 | 0.46 | 1.60 | 0.29 | 0.30 | 0.15 | 0.10 | 0.04 | 0.03 | 0.01 | 0.01 | 0.07 | 0.01 | 12.38 | 6.47 | 2.52 | 1.25 | 0.63 | 0.29 | 0.14 | 0.46 | 0.07 | 1 | 2 | 4 | 8 | 16 | 12 | 23 | 44 | 64 | 0 | 9.27 | 1 | 1 | 5.87 | 1 | 1.05 | 1.05 | 1.48 | 1.45 | 1.79 | 1.9 | 6.15 | 2.03 | NA | NA | NA | NA | NA | 1 | 0 | 1 | 0 | 0.8 | 0.01 | 0.94 | 0 | 0.69 | 0.01 | 0.91 | 0 | 0.63 | 0.01 | 0.03 | 0.42 | 0.11 | 0.11 |
899 | libgromacs_mpi.so.9.0.0 - impl_x86_avx_512_simd_float.h:181-461 [...] | void gmx::nbnxmKernelSimd<(KernelLayout)1, (gmx::KernelCoulombType)1, (VdwCutoffCheck)0, (LJCombinationRule)1, (InteractionModifiers)1, (LJEwald)0, (EnergyOutput)1>(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float c... | Innermost | 0.26 | 0.24 | 0.23 | 0.21 | 0.22 | 0.18 | 0.15 | 0.13 | 0.11 | 0.26 | 0.24 | 0.23 | 0.21 | 0.22 | 0.18 | 0.15 | 0.13 | 0.11 | 2.12 | 1.24 | 0.71 | 0.39 | 0.23 | 0.27 | 0.12 | 0.08 | 0.05 | 2.12 | 1.24 | 0.71 | 0.39 | 0.23 | 0.27 | 0.12 | 0.08 | 0.05 | 2.12 | 1.06 | 0.55 | 0.31 | 0.16 | 0.09 | 0.05 | 0.02 | 0.01 | 2.12 | 1.06 | 0.55 | 0.31 | 0.16 | 0.09 | 0.05 | 0.02 | 0.01 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 81 | 125 | 85.25 | 82.01 | 1.02 | 1 | 1.02 | 1 | 1.17 | 1.3 | 1.28 | 1.42 | 1.97 | 1.58 | 2.51 | 2.43 | 3 | 0 | 1 | 4 | 3 | 1 | 0 | 1 | 0 | 0.96 | 0.01 | 0.86 | 0.03 | 0.81 | 0.04 | 0.76 | 0.04 | 0.7 | 0.04 | 0.81 | 0.03 | 0.82 | 0.02 |
2549 | libgromacs_mpi.so.9.0.0 - pairlist_simd_2xmm.h:185-229 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.68] | Innermost | 0.21 | 0.20 | 0.19 | 0.15 | 0.16 | 0.13 | 0.07 | 0.11 | 0.11 | 0.21 | 0.20 | 0.19 | 0.15 | 0.16 | 0.13 | 0.07 | 0.11 | 0.11 | 1.66 | 0.90 | 0.50 | 0.29 | 0.16 | 0.15 | 0.08 | 0.06 | 0.04 | 1.66 | 0.90 | 0.50 | 0.29 | 0.16 | 0.15 | 0.08 | 0.06 | 0.04 | 1.66 | 0.87 | 0.45 | 0.22 | 0.12 | 0.06 | 0.02 | 0.02 | 0.01 | 1.66 | 0.87 | 0.45 | 0.22 | 0.12 | 0.06 | 0.02 | 0.02 | 0.01 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 83 | 126 | 76.58 | 42.22 | 1.08 | 1.22 | 1.6 | 1 | 1.04 | 1.11 | 1.3 | 1.4 | 1.5 | 2.14 | 2.41 | 2.28 | 2.5 | 0 | 0 | 1.5 | 0 | 1 | 0 | 0.96 | 0.01 | 0.92 | 0.01 | 0.93 | 0.01 | 0.88 | 0.02 | 0.83 | 0.02 | 1.11 | 0 | 0.73 | 0.03 | 0.66 | 0.04 |
2952 | libgromacs_mpi.so.9.0.0 - domdec.cpp:289-291 [...] | dd_move_x(gmx_domdec_t*, float const (*) [3], gmx::ArrayRef<gmx::BasicVector<float> >, gmx_wallcycle*) | Innermost | 0.00 | 0.01 | 0.05 | 0.15 | 0.09 | 0.05 | 0.06 | 0.08 | 0.09 | 0.00 | 0.01 | 0.05 | 0.15 | 0.09 | 0.05 | 0.06 | 0.08 | 0.09 | | 0.12 | 0.18 | 0.32 | 0.12 | 0.09 | 0.06 | 0.04 | 0.05 | | 0.12 | 0.18 | 0.32 | 0.12 | 0.09 | 0.06 | 0.04 | 0.05 | | 0.06 | 0.12 | 0.23 | 0.06 | 0.02 | 0.02 | 0.01 | 0.01 | | 0.06 | 0.12 | 0.23 | 0.06 | 0.02 | 0.02 | 0.01 | 0.01 | | 1 | 3 | 7 | 15 | 19 | 39 | 78 | 121 | 0 | 9.9 | 1 | 1 | 6.15 | 0 | 1 | 1.09 | 1.23 | 1.76 | 2.31 | 1.84 | 1.99 | 3 | 0 | 1 | 1 | 1 | 0 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
897 | libgromacs_mpi.so.9.0.0 - impl_x86_avx_512_simd_float.h:181-461 [...] | void gmx::nbnxmKernelSimd<(KernelLayout)1, (gmx::KernelCoulombType)1, (VdwCutoffCheck)0, (LJCombinationRule)1, (InteractionModifiers)1, (LJEwald)0, (EnergyOutput)1>(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float c... | Innermost | 0.23 | 0.24 | 0.21 | 0.21 | 0.18 | 0.13 | 0.10 | 0.10 | 0.09 | 0.23 | 0.24 | 0.21 | 0.21 | 0.18 | 0.13 | 0.10 | 0.10 | 0.09 | 1.82 | 1.17 | 0.71 | 0.50 | 0.27 | 0.27 | 0.12 | 0.08 | 0.06 | 1.82 | 1.17 | 0.71 | 0.50 | 0.27 | 0.27 | 0.12 | 0.08 | 0.06 | 1.82 | 1.04 | 0.51 | 0.31 | 0.14 | 0.06 | 0.03 | 0.02 | 0.01 | 1.82 | 1.04 | 0.51 | 0.31 | 0.14 | 0.06 | 0.03 | 0.02 | 0.01 | 1 | 2 | 4 | 8 | 16 | 20 | 35 | 61 | 97 | 86.83 | 83.8 | 1.03 | 1 | 1.01 | 1 | 1.13 | 1.39 | 1.64 | 2.04 | 2.63 | 2.05 | 2.55 | 3.16 | 2 | 0 | 1 | 4 | 4 | 1 | 0 | 0.88 | 0.03 | 0.89 | 0.02 | 0.74 | 0.05 | 0.84 | 0.03 | 0.88 | 0.02 | 0.85 | 0.02 | 0.94 | 0.01 | 0.9 | 0.01 |
14988 | libgromacs_mpi.so.9.0.0 - lincs.cpp:1135-1137 [...] | gmx::do_lincs(gmx::ArrayRefWithPadding<gmx::BasicVector<float> const>, gmx::ArrayRefWithPadding<gmx::BasicVector<float> >, float const (*) [3], t_pbc*, gmx::Lincs*, int, gmx::ArrayRef<float const>, t_commrec const*, bool, floa... | Innermost | 0.21 | 0.20 | 0.21 | 0.18 | 0.17 | 0.11 | 0.09 | 0.08 | 0.08 | 0.21 | 0.20 | 0.21 | 0.18 | 0.17 | 0.11 | 0.09 | 0.08 | 0.08 | 1.65 | 0.88 | 0.63 | 0.38 | 0.20 | 0.18 | 0.14 | 0.08 | 0.09 | 1.65 | 0.88 | 0.63 | 0.38 | 0.20 | 0.18 | 0.14 | 0.08 | 0.09 | 1.65 | 0.88 | 0.51 | 0.27 | 0.12 | 0.05 | 0.03 | 0.01 | 0.01 | 1.65 | 0.88 | 0.51 | 0.27 | 0.12 | 0.05 | 0.03 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 15 | 20 | 34 | 62 | 95 | 22.22 | 10.42 | 1 | 1.12 | 5.89 | 1 | 1 | 1.24 | 1.37 | 1.55 | 2.24 | 2.64 | 3.05 | 4.76 | 1 | 3 | 0 | 1 | 0 | 1 | 0 | 0.93 | 0.01 | 0.81 | 0.04 | 0.75 | 0.04 | 0.83 | 0.03 | 1 | 0 | 0.91 | 0.01 | 1 | 0 | 0.86 | 0.01 |
17627 | libgromacs_mpi.so.9.0.0 - fft5d.cpp:912-918 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | InBetween | 0.03 | 0.02 | 0.03 | 0.03 | 0.03 | 0.02 | 0.02 | 0.12 | 0.08 | 1.11 | 1.05 | 0.95 | 0.72 | 0.66 | 0.51 | 0.36 | 0.52 | 0.42 | 0.26 | 0.11 | 0.10 | 0.05 | 0.04 | 0.05 | 0.04 | 0.12 | 0.06 | 8.91 | 4.76 | 2.38 | 1.21 | 0.61 | 0.75 | 0.37 | 0.31 | 0.20 | 0.26 | 0.11 | 0.08 | 0.04 | 0.02 | 0.01 | 0.01 | 0.02 | 0.01 | 8.91 | 4.61 | 2.28 | 1.07 | 0.49 | 0.25 | 0.12 | 0.08 | 0.05 | 1 | 2 | 4 | 7 | 16 | 12 | 24 | 44 | 64 | 0 | 7.42 | 1 | 1 | 8.46 | 1 | 1.02 | 1.38 | 1.28 | 1.62 | 2.1 | 2.24 | 2.14 | 2.06 | NA | NA | NA | NA | NA | 1 | 0 | 1.21 | 0 | 0.85 | 0 | 0.87 | 0 | 0.75 | 0.01 | 0.82 | 0 | 0.69 | 0.01 | 0.1 | 0.11 | 0.14 | 0.07 |
15118 | libgromacs_mpi.so.9.0.0 - mdatoms.cpp:267-438 [...] | atoms2md(gmx_mtop_t const&, t_inputrec const&, int, gmx::ArrayRef<int>, int, gmx::MDAtoms*) [clone .extracted] | Outermost | 0.03 | 0.04 | 0.04 | 0.05 | 0.07 | 0.05 | 0.06 | 0.08 | 0.08 | 0.03 | 0.04 | 0.04 | 0.05 | 0.07 | 0.05 | 0.06 | 0.08 | 0.08 | 0.21 | 0.18 | 0.10 | 0.11 | 0.08 | 0.06 | 0.05 | 0.04 | 0.04 | 0.22 | 0.18 | 0.10 | 0.11 | 0.08 | 0.06 | 0.05 | 0.04 | 0.04 | 0.21 | 0.16 | 0.10 | 0.08 | 0.05 | 0.02 | 0.02 | 0.01 | 0.01 | 0.22 | 0.17 | 0.10 | 0.08 | 0.05 | 0.02 | 0.02 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 81 | 124 | 9.38 | 8.86 | 1.38 | 1.81 | 5.93 | 1 | 1.11 | 1.09 | 1.42 | 1.44 | 1.77 | 1.66 | 2.16 | 2.73 | NA | NA | NA | NA | NA | 1 | 0 | 0.65 | 0.01 | 0.55 | 0.02 | 0.32 | 0.04 | 0.25 | 0.05 | 0.29 | 0.03 | 0.17 | 0.05 | 0.14 | 0.06 | 0.11 | 0.07 |
16938 | libgromacs_mpi.so.9.0.0 - vec.h:141-335 [...] | std::enable_if<(((BondedKernelFlavor)2)!=((BondedKernelFlavor)0))||(!(1)), float>::type (anonymous namespace)::angles<(BondedKernelFlavor)2>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, flo... | Single | 0.19 | 0.16 | 0.17 | 0.14 | 0.12 | 0.09 | 0.08 | 0.08 | 0.08 | 0.19 | 0.16 | 0.17 | 0.14 | 0.12 | 0.09 | 0.08 | 0.08 | 0.08 | 1.48 | 0.83 | 0.57 | 0.30 | 0.21 | 0.18 | 0.12 | 0.08 | 0.05 | 1.48 | 0.83 | 0.57 | 0.30 | 0.21 | 0.18 | 0.12 | 0.08 | 0.05 | 1.48 | 0.72 | 0.41 | 0.20 | 0.09 | 0.04 | 0.03 | 0.01 | 0.01 | 1.48 | 0.72 | 0.41 | 0.20 | 0.09 | 0.04 | 0.03 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 16 | 19 | 35 | 57 | 88 | 28.98 | 11.33 | 1.18 | 1.55 | 5.9 | 1 | 1.17 | 1.4 | 1.49 | 2.28 | 2.49 | 2.48 | 3.16 | 2.44 | 2.5 | 0 | 0 | 5 | 0 | 1 | 0 | 1.04 | 0 | 0.9 | 0.02 | 0.92 | 0.01 | 1.01 | -0 | 1.08 | 0 | 0.87 | 0.01 | 0.95 | 0 | 0.82 | 0.01 |
106 | gmx_mpi - | __intel_avx_rep_memcpy | Single | 0.18 | 0.19 | 0.25 | 0.33 | 0.24 | 0.08 | 0.05 | 0.10 | 0.07 | 0.18 | 0.19 | 0.25 | 0.33 | 0.24 | 0.08 | 0.05 | 0.10 | 0.07 | 1.46 | 0.85 | 0.74 | 0.59 | 0.23 | 0.12 | 0.08 | 0.08 | 0.07 | 1.46 | 0.85 | 0.74 | 0.59 | 0.23 | 0.12 | 0.08 | 0.08 | 0.07 | 1.46 | 0.84 | 0.60 | 0.50 | 0.18 | 0.04 | 0.02 | 0.02 | 0.01 | 1.46 | 0.84 | 0.60 | 0.50 | 0.18 | 0.04 | 0.02 | 0.02 | 0.01 | 1 | 2 | 4 | 8 | 16 | 12 | 24 | 45 | 64 | 100 | 50 | 1 | 1 | 1.33 | 1 | 1.02 | 1.23 | 1.2 | 1.31 | 1.27 | 1.74 | 1.77 | 2.76 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0.87 | 0.02 | 0.61 | 0.1 | 0.37 | 0.21 | 0.51 | 0.12 | 1.23 | 0 | 1.32 | 0 | 0.71 | 0.03 | 0.89 | 0.01 |
3294 | libgromacs_mpi.so.9.0.0 - localtopology.cpp:323-577 [...] | int assignInteractionsForAtom<false>(AtomIndexSet const&, reverse_ilist_t const&, gmx_ga2la_t const&, gmx_domdec_zones_t const&, bool, int const*, bool, float, t_pbc const*, gmx::ArrayRef<gmx::BasicVector<float> const>, In... | Outermost | 0.00 | 0.05 | 0.05 | 0.06 | 0.06 | 0.04 | 0.05 | 0.06 | 0.07 | 0.00 | 0.07 | 0.08 | 0.09 | 0.09 | 0.09 | 0.10 | 0.12 | 0.12 | | 0.28 | 0.19 | 0.15 | 0.08 | 0.09 | 0.06 | 0.05 | 0.05 | | 0.38 | 0.29 | 0.20 | 0.12 | 0.14 | 0.20 | 0.07 | 0.07 | | 0.22 | 0.13 | 0.09 | 0.04 | 0.02 | 0.02 | 0.01 | 0.01 | | 0.32 | 0.20 | 0.14 | 0.07 | 0.04 | 0.03 | 0.02 | 0.01 | | 2 | 4 | 8 | 16 | 17 | 38 | 63 | 92 | 5.68 | 9.06 | 2.73 | 2.15 | 7.66 | 0 | 1.3 | 1.49 | 1.62 | 1.93 | 2.25 | 2.39 | 2.75 | 2.95 | NA | NA | NA | NA | NA | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
894 | libgromacs_mpi.so.9.0.0 - simd_kernel.h:518-518 [...] | void gmx::nbnxmKernelSimd<(KernelLayout)1, (gmx::KernelCoulombType)1, (VdwCutoffCheck)0, (LJCombinationRule)1, (InteractionModifiers)1, (LJEwald)0, (EnergyOutput)1>(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float c... | Innermost | 0.15 | 0.15 | 0.14 | 0.12 | 0.14 | 0.11 | 0.09 | 0.07 | 0.06 | 0.15 | 0.15 | 0.14 | 0.12 | 0.14 | 0.11 | 0.09 | 0.07 | 0.06 | 1.19 | 0.69 | 0.48 | 0.27 | 0.47 | 0.58 | 0.32 | 0.16 | 0.09 | 1.19 | 0.69 | 0.48 | 0.27 | 0.47 | 0.58 | 0.32 | 0.16 | 0.09 | 1.19 | 0.66 | 0.34 | 0.18 | 0.10 | 0.06 | 0.03 | 0.01 | 0.01 | 1.19 | 0.66 | 0.34 | 0.18 | 0.10 | 0.06 | 0.03 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 7 | 8 | 15 | 21 | 36 | 100 | 91.67 | 1 | 1 | 1.02 | 1 | 1.04 | 1.42 | 1.5 | 2.02 | 2.64 | 2.55 | 2.5 | 2.31 | 1 | 0 | 1 | 2 | 1 | 1 | 0 | 0.91 | 0.01 | 0.88 | 0.02 | 0.81 | 0.02 | 0.73 | 0.04 | 0.67 | 0.04 | 0.63 | 0.03 | 0.87 | 0.01 | 0.8 | 0.01 |
17447 | libgromacs_mpi.so.9.0.0 - pme_solve.cpp:233-233 [...] | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.14 | 0.14 | 0.13 | 0.12 | 0.10 | 0.07 | 0.06 | 0.07 | 0.06 | 0.14 | 0.14 | 0.13 | 0.12 | 0.10 | 0.07 | 0.06 | 0.07 | 0.06 | 1.12 | 0.67 | 0.33 | 0.23 | 0.12 | 0.13 | 0.09 | 0.05 | 0.04 | 1.12 | 0.67 | 0.33 | 0.23 | 0.12 | 0.13 | 0.09 | 0.05 | 0.04 | 1.12 | 0.61 | 0.31 | 0.18 | 0.08 | 0.04 | 0.02 | 0.01 | 0.01 | 1.12 | 0.61 | 0.31 | 0.18 | 0.08 | 0.04 | 0.02 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 16 | 12 | 24 | 44 | 63 | 100 | 100 | 1 | 1 | 1 | 1 | 1.09 | 1.08 | 1.29 | 1.63 | 1.34 | 1.73 | 1.82 | 1.94 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 0.92 | 0.01 | 0.91 | 0.01 | 0.77 | 0.03 | 0.91 | 0.01 | 0.96 | 0 | 0.95 | 0 | 0.83 | 0.01 | 0.76 | 0.02 |
2556 | libgromacs_mpi.so.9.0.0 - pairlist.cpp:3518-3520 | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.68] | Innermost | 0.31 | 0.34 | 0.30 | 0.24 | 0.07 | 0.04 | 0.03 | 0.04 | 0.06 | 0.31 | 0.34 | 0.30 | 0.24 | 0.07 | 0.04 | 0.03 | 0.04 | 0.06 | 2.51 | 1.49 | 0.78 | 0.47 | 0.20 | 0.18 | 0.09 | 0.06 | 0.05 | 2.51 | 1.49 | 0.78 | 0.47 | 0.20 | 0.18 | 0.09 | 0.06 | 0.05 | 2.51 | 1.48 | 0.71 | 0.35 | 0.05 | 0.02 | 0.01 | 0.01 | 0.01 | 2.51 | 1.48 | 0.71 | 0.35 | 0.05 | 0.02 | 0.01 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 8 | 7 | 11 | 48 | 90 | 0 | 6.25 | 1.11 | 1.46 | 16 | 1 | 1.01 | 1.09 | 1.33 | 2.05 | 1.97 | 1.65 | 3.27 | 3.17 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0.85 | 0.05 | 0.88 | 0.04 | 0.89 | 0.03 | 3.22 | 0 | 3.92 | 0 | 3.94 | 0 | 2.81 | 0 | 1.75 | 0 |
4189 | libgromacs_mpi.so.9.0.0 - threaded_force_buffer.cpp:200-200 [...] | void gmx::(anonymous namespace)::reduceThreadForceBuffers<float [4]>(gmx::ArrayRef<gmx::BasicVector<float> >, gmx::ArrayRef<std::unique_ptr<gmx::ThreadForceBuffer<float [4]>, std::default_delete<gmx::ThreadForceBuffer<fl... | Innermost | 0.11 | 0.12 | 0.13 | 0.11 | 0.12 | 0.06 | 0.06 | 0.06 | 0.06 | 0.11 | 0.12 | 0.13 | 0.11 | 0.12 | 0.06 | 0.06 | 0.06 | 0.06 | 0.90 | 0.58 | 0.33 | 0.19 | 0.21 | 0.12 | 0.10 | 0.06 | 0.05 | 0.90 | 0.58 | 0.33 | 0.19 | 0.21 | 0.12 | 0.10 | 0.06 | 0.05 | 0.90 | 0.52 | 0.30 | 0.17 | 0.09 | 0.03 | 0.02 | 0.01 | 0.01 | 0.90 | 0.52 | 0.30 | 0.17 | 0.09 | 0.03 | 0.02 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 16 | 19 | 34 | 61 | 87 | 28.57 | 11.61 | 1 | 1 | 6.4 | 1 | 1.12 | 1.08 | 1.16 | 2.41 | 2.31 | 2.75 | 2.88 | 3.35 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 0.87 | 0.02 | 0.75 | 0.03 | 0.67 | 0.04 | 0.63 | 0.04 | 0.92 | 0.01 | 0.73 | 0.02 | 0.76 | 0.01 | 0.69 | 0.02 |
15488 | libgromacs_mpi.so.9.0.0 - update.cpp:379-405 [...] | gmx::Update::Impl::update_coords(t_inputrec const&, long, int, bool, gmx::ArrayRef<ParticleType const>, gmx::ArrayRef<float const>, gmx::ArrayRef<gmx::BasicVector<float> const>, t_state*, gmx::ArrayRefWithPadding<gmx::BasicVe... | Single | 0.15 | 0.13 | 0.12 | 0.11 | 0.09 | 0.08 | 0.05 | 0.07 | 0.05 | 0.15 | 0.13 | 0.12 | 0.11 | 0.09 | 0.08 | 0.05 | 0.07 | 0.05 | 1.18 | 0.63 | 0.33 | 0.24 | 0.08 | 0.10 | 0.06 | 0.04 | 0.02 | 1.18 | 0.63 | 0.33 | 0.24 | 0.08 | 0.10 | 0.06 | 0.04 | 0.02 | 1.18 | 0.59 | 0.29 | 0.17 | 0.06 | 0.04 | 0.02 | 0.01 | 0.01 | 1.18 | 0.59 | 0.29 | 0.17 | 0.06 | 0.04 | 0.02 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 79 | 108 | 100 | 25 | 1.2 | 1.22 | 2.67 | 1 | 1.07 | 1.17 | 1.44 | 1.25 | 1.67 | 2.3 | 2.62 | 2.25 | 1 | 1 | 5 | 1 | 0 | 1 | 0 | 1 | -0 | 1.03 | -0 | 0.86 | 0.02 | 1.15 | 0 | 0.99 | 0 | 1.04 | -0 | 0.86 | 0.01 | 0.98 | 0 |
15098 | libgromacs_mpi.so.9.0.0 - md_support.cpp:181-209 [...] | void calc_ke_part_normal<false>(float const (*) [3], gmx::ArrayRef<gmx::BasicVector<float> const>, gmx::ArrayRef<gmx::BasicVector<float> const>, float const (*) [3], t_grpopts const*, t_mdatoms const*, gmx_ekindata_t*, t_nrnb*... | Innermost | 0.12 | 0.10 | 0.10 | 0.08 | 0.09 | 0.06 | 0.04 | 0.05 | 0.05 | 0.12 | 0.10 | 0.10 | 0.08 | 0.09 | 0.06 | 0.04 | 0.05 | 0.05 | 1.00 | 0.51 | 0.26 | 0.14 | 0.11 | 0.09 | 0.06 | 0.03 | 0.04 | 1.00 | 0.51 | 0.26 | 0.14 | 0.11 | 0.09 | 0.06 | 0.03 | 0.04 | 1.00 | 0.45 | 0.23 | 0.11 | 0.06 | 0.03 | 0.01 | 0.01 | 0.01 | 1.00 | 0.45 | 0.23 | 0.11 | 0.06 | 0.03 | 0.01 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 16 | 20 | 39 | 75 | 104 | 52.94 | 24.63 | 1.16 | 1.54 | 2.26 | 1 | 1.13 | 1.14 | 1.24 | 1.73 | 2.07 | 2.67 | 1.95 | 3.5 | 0 | 2 | 1 | 1 | 0 | 1 | 0 | 1.1 | 0 | 1.09 | 0 | 1.1 | 0 | 0.98 | 0 | 1.09 | 0 | 1.14 | 0 | 1.03 | -0 | 0.83 | 0.01 |
2539 | libgromacs_mpi.so.9.0.0 - pairlist.cpp:1330-1430 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.68] | InBetween | 0.09 | 0.07 | 0.07 | 0.08 | 0.07 | 0.05 | 0.05 | 0.05 | 0.05 | 0.12 | 0.10 | 0.10 | 0.11 | 0.09 | 0.06 | 0.06 | 0.06 | 0.06 | 0.73 | 0.39 | 0.20 | 0.16 | 0.10 | 0.06 | 0.06 | 0.04 | 0.04 | 0.93 | 0.57 | 0.29 | 0.20 | 0.12 | 0.07 | 0.08 | 0.04 | 0.04 | 0.73 | 0.31 | 0.18 | 0.12 | 0.05 | 0.02 | 0.02 | 0.01 | 0.01 | 0.93 | 0.45 | 0.25 | 0.16 | 0.07 | 0.03 | 0.02 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 76 | 102 | 0 | 7.64 | 1 | 1 | 9.5 | 1 | 1.26 | 1.12 | 1.29 | 2.02 | 1.66 | 2.61 | 2.77 | 3.12 | NA | NA | NA | NA | NA | 1 | 0 | 1.19 | 0 | 1.03 | -0 | 0.74 | 0.02 | 0.89 | 0.01 | 1.01 | -0 | 0.74 | 0.01 | 0.75 | 0.01 | 0.64 | 0.02 |
888 | libgromacs_mpi.so.9.0.0 - simd_kernel.h:510-513 [...] | void gmx::nbnxmKernelSimd<(KernelLayout)1, (gmx::KernelCoulombType)1, (VdwCutoffCheck)0, (LJCombinationRule)1, (InteractionModifiers)1, (LJEwald)0, (EnergyOutput)0>(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float c... | Innermost | 0.13 | 0.11 | 0.09 | 0.08 | 0.09 | 0.07 | 0.05 | 0.06 | 0.05 | 0.13 | 0.11 | 0.09 | 0.08 | 0.09 | 0.07 | 0.05 | 0.06 | 0.05 | 1.02 | 0.56 | 0.30 | 0.21 | 0.43 | 0.34 | 0.20 | 0.14 | 0.07 | 1.02 | 0.56 | 0.30 | 0.21 | 0.43 | 0.34 | 0.20 | 0.14 | 0.07 | 1.02 | 0.48 | 0.23 | 0.12 | 0.07 | 0.03 | 0.02 | 0.01 | 0.01 | 1.02 | 0.48 | 0.23 | 0.12 | 0.07 | 0.03 | 0.02 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 7 | 8 | 16 | 20 | 37 | 94.62 | 84.21 | 1 | 1 | 1.05 | 1 | 1.17 | 1.32 | 1.74 | 2.71 | 2.52 | 3.17 | 2.56 | 2.46 | 2 | 1 | 1 | 3 | 3 | 1 | 0 | 1.07 | 0 | 1.13 | 0 | 1.06 | -0 | 0.92 | 0.01 | 0.96 | 0 | 1.01 | -0 | 0.92 | 0 | 0.9 | 0 |
17403 | libgromacs_mpi.so.9.0.0 - pme_pp.cpp:604-604 [...] | gmx_pme_receive_f(gmx::PmePpCommGpu*, t_commrec const*, gmx::ForceWithVirial*, float*, float*, float*, float*, bool, bool, float*) | Single | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.07 | 0.06 | 0.06 | 0.05 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.07 | 0.06 | 0.06 | 0.05 | | | | | | 0.09 | 0.07 | 0.04 | 0.03 | | | | | | 0.09 | 0.07 | 0.04 | 0.03 | | | | | | 0.03 | 0.02 | 0.01 | 0.01 | | | | | | 0.03 | 0.02 | 0.01 | 0.01 | | | | | | 20 | 40 | 78 | 106 | 28.57 | 11.61 | 1.17 | 1.12 | 5.89 | 0 | 0 | 0 | 0 | 0 | 1.69 | 2.39 | 2.42 | 3 | 1 | 0 | 2 | 0 | 0 | | | | | | | | | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
2530 | libgromacs_mpi.so.9.0.0 - pairlist.cpp:162-4126 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.68] | InBetween | 0.04 | 0.04 | 0.04 | 0.05 | 0.04 | 0.04 | 0.03 | 0.04 | 0.04 | 1.92 | 2.09 | 2.11 | 2.11 | 2.12 | 1.64 | 1.57 | 1.12 | 1.12 | 0.29 | 0.18 | 0.11 | 0.09 | 0.05 | 0.05 | 0.04 | 0.03 | 0.03 | 15.37 | 9.16 | 5.29 | 3.29 | 1.80 | 1.55 | 1.09 | 0.33 | 0.25 | 0.29 | 0.16 | 0.10 | 0.07 | 0.03 | 0.02 | 0.01 | 0.01 | 0.01 | 15.37 | 9.13 | 5.07 | 3.14 | 1.58 | 0.80 | 0.51 | 0.18 | 0.14 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 70 | 95 | 20.21 | 18.1 | 3.56 | 1.01 | 1.37 | 1 | 1.16 | 1.19 | 1.33 | 1.6 | 1.9 | 2.25 | 2.23 | 3.21 | NA | NA | NA | NA | NA | 1 | 0 | 0.91 | 0 | 0.75 | 0.01 | 0.54 | 0.02 | 0.64 | 0.01 | 0.5 | 0.02 | 0.41 | 0.02 | 0.36 | 0.03 | 0.28 | 0.03 |
15320 | libgromacs_mpi.so.9.0.0 - settle.cpp:425-425 [...] | gmx::csettle(gmx::SettleData const&, int, int, t_pbc const*, gmx::ArrayRefWithPadding<gmx::BasicVector<float> const>, gmx::ArrayRefWithPadding<gmx::BasicVector<float> >, float, gmx::ArrayRefWithPadding<gmx::BasicVector<flo... | Single | 0.11 | 0.10 | 0.10 | 0.09 | 0.07 | 0.06 | 0.03 | 0.04 | 0.04 | 0.11 | 0.10 | 0.10 | 0.09 | 0.07 | 0.06 | 0.03 | 0.04 | 0.04 | 0.90 | 0.45 | 0.31 | 0.20 | 0.08 | 0.08 | 0.04 | 0.04 | 0.03 | 0.90 | 0.45 | 0.31 | 0.20 | 0.08 | 0.08 | 0.04 | 0.04 | 0.03 | 0.90 | 0.44 | 0.24 | 0.13 | 0.05 | 0.03 | 0.01 | 0.01 | 0.00 | 0.90 | 0.44 | 0.24 | 0.13 | 0.05 | 0.03 | 0.01 | 0.01 | 0.00 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 69 | 97 | 98.37 | 94.83 | 1.01 | 1 | 1.01 | 1 | 1.02 | 1.32 | 1.58 | 1.61 | 1.86 | 2.22 | 2.76 | 3.18 | 2 | 0 | 3 | 1 | 37 | 1 | 0 | 1.02 | -0 | 0.94 | 0.01 | 0.89 | 0.01 | 1.13 | 0 | 1.05 | -0 | 1.25 | 0 | 1.01 | -0 | 0.98 | 0 |
14987 | libgromacs_mpi.so.9.0.0 - lincs.cpp:1133-1137 [...] | gmx::do_lincs(gmx::ArrayRefWithPadding<gmx::BasicVector<float> const>, gmx::ArrayRefWithPadding<gmx::BasicVector<float> >, float const (*) [3], t_pbc*, gmx::Lincs*, int, gmx::ArrayRef<float const>, t_commrec const*, bool, floa... | Outermost | 0.14 | 0.14 | 0.13 | 0.13 | 0.09 | 0.06 | 0.04 | 0.05 | 0.04 | 0.34 | 0.35 | 0.34 | 0.32 | 0.26 | 0.16 | 0.13 | 0.13 | 0.12 | 1.09 | 0.72 | 0.41 | 0.29 | 0.15 | 0.10 | 0.08 | 0.05 | 0.04 | 2.74 | 1.61 | 1.02 | 0.66 | 0.35 | 0.28 | 0.17 | 0.11 | 0.10 | 1.09 | 0.63 | 0.31 | 0.20 | 0.07 | 0.03 | 0.01 | 0.01 | 0.00 | 2.74 | 1.52 | 0.82 | 0.47 | 0.19 | 0.08 | 0.04 | 0.02 | 0.01 | 1 | 2 | 4 | 8 | 14 | 19 | 32 | 55 | 76 | 18.18 | 10.23 | 1.83 | 2.49 | 10.56 | 1 | 1.15 | 1.35 | 1.44 | 2.05 | 2.07 | 2.82 | 2.69 | 3.76 | NA | NA | NA | NA | NA | 1 | 0 | 0.86 | 0.02 | 0.89 | 0.01 | 0.69 | 0.04 | 1.03 | -0 | 1.18 | 0 | 1.28 | 0 | 1.17 | 0 | 1.19 | 0 |
3298 | libgromacs_mpi.so.9.0.0 - localtopology.cpp:506-537 [...] | int assignInteractionsForAtom<false>(AtomIndexSet const&, reverse_ilist_t const&, gmx_ga2la_t const&, gmx_domdec_zones_t const&, bool, int const*, bool, float, t_pbc const*, gmx::ArrayRef<gmx::BasicVector<float> const>, In... | Innermost | 0.00 | 0.02 | 0.02 | 0.03 | 0.02 | 0.03 | 0.04 | 0.04 | 0.04 | 0.00 | 0.02 | 0.02 | 0.03 | 0.02 | 0.03 | 0.04 | 0.04 | 0.04 | | 0.10 | 0.08 | 0.06 | 0.04 | 0.05 | 0.16 | 0.05 | 0.06 | | 0.10 | 0.08 | 0.06 | 0.04 | 0.05 | 0.16 | 0.05 | 0.06 | | 0.09 | 0.06 | 0.04 | 0.02 | 0.01 | 0.01 | 0.01 | 0.00 | | 0.09 | 0.06 | 0.04 | 0.02 | 0.01 | 0.01 | 0.01 | 0.00 | | 2 | 4 | 8 | 13 | 19 | 34 | 54 | 76 | 33.33 | 13.02 | 2.33 | 1 | 10.5 | 0 | 1.24 | 1.33 | 1.49 | 1.57 | 2.13 | 7.1 | 4.07 | 5.01 | NA | NA | NA | NA | NA | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
16948 | libgromacs_mpi.so.9.0.0 - bonded.cpp:1913-2008 [...] | std::enable_if<(((BondedKernelFlavor)2)!=((BondedKernelFlavor)0))||(!(1)), float>::type (anonymous namespace)::pdihs<(BondedKernelFlavor)2>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, floa... | Innermost | 0.11 | 0.09 | 0.07 | 0.05 | 0.06 | 0.05 | 0.04 | 0.04 | 0.04 | 0.11 | 0.09 | 0.07 | 0.05 | 0.06 | 0.05 | 0.04 | 0.04 | 0.04 | 0.85 | 0.47 | 0.22 | 0.14 | 0.11 | 0.11 | 0.05 | 0.05 | 0.04 | 0.85 | 0.47 | 0.22 | 0.14 | 0.11 | 0.11 | 0.05 | 0.05 | 0.04 | 0.85 | 0.40 | 0.17 | 0.08 | 0.04 | 0.02 | 0.01 | 0.01 | 0.00 | 0.85 | 0.40 | 0.17 | 0.08 | 0.04 | 0.02 | 0.01 | 0.01 | 0.00 | 1 | 2 | 4 | 8 | 15 | 18 | 32 | 49 | 72 | 2 | 7.38 | 1.27 | 1.15 | 7.72 | 1 | 1.17 | 1.36 | 1.65 | 2.43 | 2.62 | 2.11 | 3.05 | 3.58 | 2 | 0 | 0 | 3 | 1 | 1 | 0 | 1.06 | 0 | 1.29 | 0 | 1.3 | 0 | 1.2 | 0 | 1.07 | -0 | 1.02 | -0 | 0.95 | 0 | 0.93 | 0 |
15498 | libgromacs_mpi.so.9.0.0 - update.cpp:1702-1706 | gmx::Update::Impl::finish_update(t_inputrec const&, bool, int, gmx::ArrayRef<unsigned short const>, t_state*, gmx_wallcycle*, bool) [clone .extracted] | Single | 0.11 | 0.09 | 0.08 | 0.07 | 0.07 | 0.05 | 0.04 | 0.04 | 0.04 | 0.11 | 0.09 | 0.08 | 0.07 | 0.07 | 0.05 | 0.04 | 0.04 | 0.04 | 0.92 | 0.44 | 0.28 | 0.15 | 0.09 | 0.08 | 0.04 | 0.03 | 0.03 | 0.92 | 0.44 | 0.28 | 0.15 | 0.09 | 0.08 | 0.04 | 0.03 | 0.03 | 0.92 | 0.41 | 0.19 | 0.10 | 0.05 | 0.02 | 0.01 | 0.01 | 0.00 | 0.92 | 0.41 | 0.19 | 0.10 | 0.05 | 0.02 | 0.01 | 0.01 | 0.00 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 74 | 91 | 0 | 9.38 | 1 | 1 | 7.11 | 1 | 1.07 | 1.47 | 1.52 | 1.8 | 2.17 | 2.4 | 2.67 | 3.05 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 1.11 | 0 | 1.19 | 0 | 1.16 | 0 | 1.09 | 0 | 1.17 | 0 | 1.22 | 0 | 1.09 | -0 | 1.02 | -0 |
3186 | libgromacs_mpi.so.9.0.0 - domdec_specatomcomm.cpp:229-231 [...] | dd_move_x_specat(gmx_domdec_t const*, gmx_domdec_specat_comm_t*, float const (*) [3], gmx::BasicVector<float>*, gmx::BasicVector<float>*, bool) | Innermost | 0.00 | 0.00 | 0.04 | 0.10 | 0.06 | 0.03 | 0.03 | 0.03 | 0.04 | 0.00 | 0.00 | 0.04 | 0.10 | 0.06 | 0.03 | 0.03 | 0.03 | 0.04 | | | 0.15 | 0.23 | 0.09 | 0.05 | 0.03 | 0.03 | 0.03 | | | 0.15 | 0.23 | 0.09 | 0.05 | 0.03 | 0.03 | 0.03 | | | 0.09 | 0.15 | 0.04 | 0.02 | 0.01 | 0.00 | 0.00 | | | 0.09 | 0.15 | 0.04 | 0.02 | 0.01 | 0.00 | 0.00 | | | 4 | 8 | 16 | 19 | 32 | 56 | 80 | 0 | 9.9 | 1 | 1 | 6.15 | 0 | 0 | 1.71 | 1.51 | 2.07 | 1.92 | 2.13 | 2.35 | 3.26 | 0 | 1 | 1 | 1 | 0 | | | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
2542 | libgromacs_mpi.so.9.0.0 - pairlist.cpp:162-4066 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.68] | InBetween | 0.02 | 0.03 | 0.03 | 0.03 | 0.05 | 0.04 | 0.04 | 0.03 | 0.03 | 1.62 | 1.75 | 1.79 | 1.78 | 1.79 | 1.38 | 1.31 | 0.88 | 0.86 | 0.14 | 0.13 | 0.07 | 0.06 | 0.08 | 0.06 | 0.04 | 0.03 | 0.02 | 13.03 | 7.86 | 4.52 | 2.79 | 1.51 | 1.30 | 0.92 | 0.26 | 0.23 | 0.14 | 0.12 | 0.07 | 0.05 | 0.04 | 0.02 | 0.01 | 0.01 | 0.00 | 13.03 | 7.65 | 4.30 | 2.65 | 1.33 | 0.68 | 0.43 | 0.14 | 0.11 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 72 | 93 | 3.57 | 7.65 | 1.43 | 1.43 | 10.27 | 1 | 1.11 | 1.08 | 1.28 | 2.03 | 2 | 1.99 | 3.35 | 2.43 | NA | NA | NA | NA | NA | 1 | 0 | 0.62 | 0.01 | 0.56 | 0.01 | 0.36 | 0.02 | 0.23 | 0.04 | 0.24 | 0.03 | 0.16 | 0.04 | 0.22 | 0.03 | 0.19 | 0.03 |
15484 | libgromacs_mpi.so.9.0.0 - update.cpp:498-498 [...] | gmx::Update::Impl::update_coords(t_inputrec const&, long, int, bool, gmx::ArrayRef<ParticleType const>, gmx::ArrayRef<float const>, gmx::ArrayRef<gmx::BasicVector<float> const>, t_state*, gmx::ArrayRefWithPadding<gmx::BasicVe... | Single | 0.19 | 0.26 | 0.44 | 0.42 | 0.26 | 0.07 | 0.04 | 0.04 | 0.03 | 0.19 | 0.26 | 0.44 | 0.42 | 0.26 | 0.07 | 0.04 | 0.04 | 0.03 | 1.48 | 1.16 | 1.19 | 0.74 | 0.26 | 0.09 | 0.04 | 0.02 | 0.02 | 1.48 | 1.16 | 1.19 | 0.74 | 0.26 | 0.09 | 0.04 | 0.02 | 0.02 | 1.48 | 1.12 | 1.07 | 0.62 | 0.19 | 0.03 | 0.01 | 0.01 | 0.00 | 1.48 | 1.12 | 1.07 | 0.62 | 0.19 | 0.03 | 0.01 | 0.01 | 0.00 | 1 | 2 | 4 | 8 | 16 | 20 | 40 | 70 | 93 | 100 | 100 | 1 | 1 | 1 | 1 | 1.04 | 1.12 | 1.18 | 1.36 | 1.68 | 2.03 | 2.27 | 2.46 | 0 | 5 | 0 | 0 | 0 | 1 | 0 | 0.66 | 0.09 | 0.35 | 0.29 | 0.3 | 0.29 | 0.48 | 0.13 | 1.39 | 0 | 1.88 | 0 | 1.9 | 0 | 1.95 | 0 |
1545 | libgromacs_mpi.so.9.0.0 - grid.cpp:416-421 | Nbnxm::sort_atoms(int, bool, int, bool, int*, int, gmx::ArrayRef<gmx::BasicVector<float> const>, float, float, int, gmx::ArrayRef<int>) | Single | 0.02 | 0.02 | 0.02 | 0.03 | 0.03 | 0.03 | 0.02 | 0.03 | 0.03 | 0.02 | 0.02 | 0.02 | 0.03 | 0.03 | 0.03 | 0.02 | 0.03 | 0.03 | 0.14 | 0.10 | 0.06 | 0.05 | 0.04 | 0.03 | 0.03 | 0.03 | 0.02 | 0.14 | 0.10 | 0.06 | 0.05 | 0.04 | 0.03 | 0.03 | 0.03 | 0.02 | 0.13 | 0.08 | 0.04 | 0.04 | 0.02 | 0.01 | 0.01 | 0.00 | 0.00 | 0.13 | 0.08 | 0.04 | 0.04 | 0.02 | 0.01 | 0.01 | 0.00 | 0.00 | 1 | 2 | 4 | 8 | 16 | 20 | 38 | 61 | 91 | 0 | 6.62 | 1 | 1 | 15.52 | 1 | 1.25 | 1.49 | 1.18 | 1.92 | 1.69 | 2.78 | 3.21 | 2.56 | NA | NA | NA | NA | NA | 1 | 0 | 0.84 | 0 | 0.77 | 0 | 0.44 | 0.01 | 0.36 | 0.02 | 0.32 | 0.02 | 0.33 | 0.01 | 0.23 | 0.02 | 0.19 | 0.02 |
2949 | libgromacs_mpi.so.9.0.0 - domdec.cpp:297-302 [...] | dd_move_x(gmx_domdec_t*, float const (*) [3], gmx::ArrayRef<gmx::BasicVector<float> >, gmx_wallcycle*) | Innermost | 0.00 | 0.02 | 0.02 | 0.02 | 0.04 | 0.02 | 0.02 | 0.02 | 0.03 | 0.00 | 0.02 | 0.02 | 0.02 | 0.04 | 0.02 | 0.02 | 0.02 | 0.03 | | 0.15 | 0.20 | 0.26 | 0.11 | 0.10 | 0.07 | 0.03 | 0.04 | | 0.15 | 0.20 | 0.26 | 0.11 | 0.10 | 0.07 | 0.03 | 0.04 | | 0.08 | 0.05 | 0.03 | 0.03 | 0.01 | 0.01 | 0.00 | 0.00 | | 0.08 | 0.05 | 0.03 | 0.03 | 0.01 | 0.01 | 0.00 | 0.00 | | 1 | 1 | 1 | 7 | 8 | 12 | 35 | 57 | 0 | 6.25 | 1 | 1.12 | 8.62 | 0 | 1 | 1 | 1 | 1.77 | 2.71 | 2.58 | 2.66 | 3.26 | 0 | 2 | 0 | 1 | 0 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
17450 | libgromacs_mpi.so.9.0.0 - pme_solve.cpp:521-530 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.07 | 0.07 | 0.06 | 0.05 | 0.05 | 0.04 | 0.03 | 0.03 | 0.03 | 0.07 | 0.07 | 0.06 | 0.05 | 0.05 | 0.04 | 0.03 | 0.03 | 0.03 | 0.55 | 0.34 | 0.18 | 0.09 | 0.05 | 0.07 | 0.05 | 0.03 | 0.03 | 0.55 | 0.34 | 0.18 | 0.09 | 0.05 | 0.07 | 0.05 | 0.03 | 0.03 | 0.55 | 0.30 | 0.14 | 0.07 | 0.04 | 0.02 | 0.01 | 0.00 | 0.00 | 0.55 | 0.30 | 0.14 | 0.07 | 0.04 | 0.02 | 0.01 | 0.00 | 0.00 | 1 | 2 | 4 | 8 | 16 | 12 | 24 | 41 | 52 | 93.33 | 93.75 | 1 | 1 | 1.1 | 1 | 1.17 | 1.25 | 1.26 | 1.42 | 1.38 | 2.04 | 2.08 | 2.66 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 0.93 | 0 | 0.96 | 0 | 0.96 | 0 | 0.89 | 0.01 | 0.9 | 0 | 1.04 | -0 | 0.92 | 0 | 0.8 | 0.01 |
17637 | libgromacs_mpi.so.9.0.0 - fft5d.cpp:783-789 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | InBetween | 0.00 | 0.02 | 0.02 | 0.02 | 0.05 | 0.03 | 0.04 | 0.04 | 0.03 | 0.00 | 0.85 | 0.91 | 0.74 | 0.72 | 0.51 | 0.42 | 0.87 | 0.73 | | 0.08 | 0.05 | 0.06 | 0.05 | 0.08 | 0.07 | 0.04 | 0.03 | | 3.89 | 2.31 | 1.27 | 0.63 | 0.77 | 0.46 | 0.51 | 0.37 | | 0.08 | 0.04 | 0.03 | 0.04 | 0.01 | 0.01 | 0.01 | 0.00 | | 3.73 | 2.18 | 1.10 | 0.53 | 0.25 | 0.14 | 0.14 | 0.09 | | 2 | 4 | 8 | 16 | 12 | 24 | 43 | 54 | 0 | 8.33 | 1 | 1 | 14.55 | 0 | 1.07 | 1.52 | 1.66 | 1.48 | 2.23 | 2.01 | 2.46 | 2.8 | NA | NA | NA | NA | NA | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
16892 | libgromacs_mpi.so.9.0.0 - bonded.cpp:2179-2256 [...] | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type (anonymous namespace)::rbdihs<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float, float*... | Outermost | 0.07 | 0.07 | 0.06 | 0.05 | 0.05 | 0.03 | 0.03 | 0.03 | 0.03 | 0.09 | 0.09 | 0.09 | 0.07 | 0.06 | 0.05 | 0.04 | 0.04 | 0.03 | 0.55 | 0.31 | 0.19 | 0.13 | 0.24 | 0.19 | 0.09 | 0.08 | 0.04 | 0.73 | 0.38 | 0.25 | 0.18 | 0.27 | 0.26 | 0.13 | 0.10 | 0.05 | 0.55 | 0.30 | 0.15 | 0.08 | 0.04 | 0.02 | 0.01 | 0.00 | 0.00 | 0.73 | 0.38 | 0.21 | 0.10 | 0.05 | 0.02 | 0.01 | 0.01 | 0.00 | 1 | 2 | 4 | 8 | 6 | 8 | 15 | 20 | 34 | 90.91 | 87.86 | 1.02 | 1 | 1.08 | 1 | 1.02 | 1.24 | 1.65 | 2.38 | 3.08 | 2.26 | 3.27 | 2.21 | 3.5 | 0 | 0 | 9.5 | 4 | 1 | 0 | 0.92 | 0.01 | 0.9 | 0.01 | 0.92 | 0 | 0.92 | 0 | 1.16 | -0 | 0.98 | 0 | 1.05 | -0 | 0.9 | 0 |
3277 | libgromacs_mpi.so.9.0.0 - localtopology.cpp:749-762 [...] | void make_exclusions_zone<false>(gmx::ArrayRef<int const>, gmx_ga2la_t const&, gmx_domdec_zones_t const&, gmx::ArrayRef<MolblockIndices const>, std::vector<gmx_moltype_t, std::allocator<gmx_moltype_t> > const&, gmx... | InBetween | 0.00 | 0.03 | 0.03 | 0.04 | 0.06 | 0.01 | 0.02 | 0.02 | 0.03 | 0.00 | 0.03 | 0.03 | 0.04 | 0.06 | 0.03 | 0.04 | 0.04 | 0.05 | | 0.13 | 0.08 | 0.08 | 0.07 | 0.02 | 0.03 | 0.02 | 0.02 | | 0.13 | 0.08 | 0.08 | 0.07 | 0.04 | 0.04 | 0.04 | 0.03 | | 0.11 | 0.07 | 0.06 | 0.04 | 0.01 | 0.01 | 0.00 | 0.00 | | 0.11 | 0.07 | 0.06 | 0.04 | 0.01 | 0.01 | 0.01 | 0.01 | | 2 | 4 | 8 | 16 | 19 | 33 | 47 | 75 | 0 | 10.24 | 1 | 1 | 9.91 | 0 | 1.23 | 1.23 | 1.45 | 1.8 | 2.21 | 2.82 | 2.27 | 2.54 | NA | NA | NA | NA | NA | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
2528 | libgromacs_mpi.so.9.0.0 - pairlist.cpp:199-4126 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.68] | InBetween | 0.02 | 0.04 | 0.03 | 0.03 | 0.04 | 0.02 | 0.03 | 0.02 | 0.02 | 0.03 | 0.08 | 0.06 | 0.06 | 0.09 | 0.07 | 0.07 | 0.07 | 0.08 | 0.14 | 0.20 | 0.08 | 0.07 | 0.06 | 0.03 | 0.03 | 0.02 | 0.03 | 0.28 | 0.35 | 0.18 | 0.15 | 0.17 | 0.09 | 0.07 | 0.04 | 0.04 | 0.13 | 0.18 | 0.07 | 0.04 | 0.03 | 0.01 | 0.01 | 0.00 | 0.00 | 0.28 | 0.34 | 0.15 | 0.09 | 0.07 | 0.03 | 0.02 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 16 | 19 | 36 | 49 | 74 | 7.81 | 9.86 | 1.83 | 1.5 | 1.97 | 1 | 1.13 | 1.19 | 1.87 | 2.05 | 1.9 | 2.27 | 2.65 | 3.33 | NA | NA | NA | NA | NA | 1 | 0 | 0.38 | 0.03 | 0.47 | 0.02 | 0.45 | 0.01 | 0.31 | 0.02 | 0.45 | 0.01 | 0.24 | 0.02 | 0.36 | 0.01 | 0.24 | 0.02 |
17461 | libgromacs_mpi.so.9.0.0 - pme_solve.cpp:440-453 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.06 | 0.05 | 0.05 | 0.04 | 0.03 | 0.03 | 0.02 | 0.03 | 0.02 | 0.06 | 0.05 | 0.05 | 0.04 | 0.03 | 0.03 | 0.02 | 0.03 | 0.02 | 0.45 | 0.22 | 0.13 | 0.09 | 0.06 | 0.06 | 0.04 | 0.03 | 0.03 | 0.45 | 0.22 | 0.13 | 0.09 | 0.06 | 0.06 | 0.04 | 0.03 | 0.03 | 0.45 | 0.22 | 0.12 | 0.06 | 0.03 | 0.01 | 0.01 | 0.00 | 0.00 | 0.45 | 0.22 | 0.12 | 0.06 | 0.03 | 0.01 | 0.01 | 0.00 | 0.00 | 1 | 2 | 4 | 8 | 16 | 12 | 24 | 38 | 53 | 5.88 | 7.35 | 1 | 1.5 | 8 | 1 | 1.01 | 1.11 | 1.43 | 2.34 | 1.52 | 2.25 | 2.19 | 2.92 | 0 | 7 | 0 | 0 | 0 | 1 | 0 | 1.02 | -0 | 0.94 | 0 | 0.9 | 0 | 1.11 | -0 | 0.96 | 0 | 0.95 | 0 | 0.86 | 0 | 0.83 | 0 |
17446 | libgromacs_mpi.so.9.0.0 - pme_solve.cpp:233-233 [...] | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.07 | 0.06 | 0.05 | 0.04 | 0.04 | 0.03 | 0.03 | 0.03 | 0.02 | 0.07 | 0.06 | 0.05 | 0.04 | 0.04 | 0.03 | 0.03 | 0.03 | 0.02 | 0.55 | 0.28 | 0.15 | 0.08 | 0.06 | 0.06 | 0.05 | 0.03 | 0.02 | 0.55 | 0.28 | 0.15 | 0.08 | 0.06 | 0.06 | 0.05 | 0.03 | 0.02 | 0.55 | 0.27 | 0.13 | 0.06 | 0.03 | 0.02 | 0.01 | 0.00 | 0.00 | 0.55 | 0.27 | 0.13 | 0.06 | 0.03 | 0.02 | 0.01 | 0.00 | 0.00 | 1 | 2 | 4 | 8 | 16 | 12 | 24 | 41 | 54 | 100 | 100 | 1 | 1 | 1 | 1 | 1.05 | 1.2 | 1.29 | 1.81 | 1.58 | 2.05 | 2.33 | 2.5 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 1.04 | -0 | 1.08 | -0 | 1.19 | 0 | 1.05 | -0 | 1.12 | -0 | 0.95 | 0 | 0.89 | 0 | 1.02 | -0 |
3278 | libgromacs_mpi.so.9.0.0 - hashedmap.h:277-282 | void make_exclusions_zone<false>(gmx::ArrayRef<int const>, gmx_ga2la_t const&, gmx_domdec_zones_t const&, gmx::ArrayRef<MolblockIndices const>, std::vector<gmx_moltype_t, std::allocator<gmx_moltype_t> > const&, gmx... | Innermost | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.02 | 0.02 | 0.02 | 0.02 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.02 | 0.02 | 0.02 | 0.02 | | | | | | 0.04 | 0.03 | 0.02 | 0.02 | | | | | | 0.04 | 0.03 | 0.02 | 0.02 | | | | | | 0.01 | 0.01 | 0.00 | 0.00 | | | | | | 0.01 | 0.01 | 0.00 | 0.00 | | | | | | 18 | 35 | 47 | 70 | 0 | 8.33 | 1 | 1 | 15 | 0 | 0 | 0 | 0 | 0 | 2.52 | 2.76 | 2.51 | 2.67 | 0 | 0 | 0 | 0 | 1 | | | | | | | | | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
2546 | libgromacs_mpi.so.9.0.0 - pairlist_simd_2xmm.h:237-241 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.68] | InBetween | 0.06 | 0.06 | 0.04 | 0.04 | 0.04 | 0.03 | 0.02 | 0.02 | 0.02 | 0.06 | 0.06 | 0.04 | 0.04 | 0.04 | 0.03 | 0.02 | 0.02 | 0.02 | 0.47 | 0.26 | 0.14 | 0.09 | 0.05 | 0.04 | 0.03 | 0.04 | 0.02 | 0.48 | 0.26 | 0.14 | 0.09 | 0.05 | 0.04 | 0.03 | 0.04 | 0.02 | 0.47 | 0.25 | 0.11 | 0.06 | 0.03 | 0.01 | 0.01 | 0.00 | 0.00 | 0.48 | 0.25 | 0.11 | 0.06 | 0.03 | 0.01 | 0.01 | 0.00 | 0.00 | 1 | 2 | 4 | 8 | 16 | 20 | 35 | 53 | 72 | 9.09 | 10.69 | 3.36 | 1 | 8.8 | 1 | 1.05 | 1.32 | 1.43 | 1.63 | 1.95 | 2.23 | 4.17 | 2.77 | NA | NA | NA | NA | NA | 1 | 0 | 0.94 | 0 | 1.12 | 0 | 0.94 | 0 | 0.97 | 0 | 1.16 | -0 | 1.01 | -0 | 1.05 | -0 | 0.91 | 0 |
17444 | libgromacs_mpi.so.9.0.0 - pme_solve.cpp:554-560 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.05 | 0.05 | 0.04 | 0.03 | 0.03 | 0.03 | 0.02 | 0.03 | 0.02 | 0.05 | 0.05 | 0.04 | 0.03 | 0.03 | 0.03 | 0.02 | 0.03 | 0.02 | 0.43 | 0.24 | 0.13 | 0.05 | 0.04 | 0.06 | 0.04 | 0.03 | 0.03 | 0.43 | 0.24 | 0.13 | 0.05 | 0.04 | 0.06 | 0.04 | 0.03 | 0.03 | 0.43 | 0.22 | 0.11 | 0.04 | 0.02 | 0.02 | 0.01 | 0.00 | 0.00 | 0.43 | 0.22 | 0.11 | 0.04 | 0.02 | 0.02 | 0.01 | 0.00 | 0.00 | 1 | 2 | 4 | 8 | 16 | 12 | 24 | 43 | 48 | 100 | 58.33 | 1 | 1.4 | 1.4 | 1 | 1.12 | 1.27 | 1.26 | 1.82 | 1.35 | 1.95 | 2.46 | 3.33 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1.01 | -0 | 1.23 | 0 | 1.09 | -0 | 0.8 | 0.01 | 1 | 0 | 0.81 | 0.01 | 0.84 | 0 |
3265 | libgromacs_mpi.so.9.0.0 - localtopology.cpp:104-701 [...] | int make_bondeds_zone<false>(gmx_reverse_top_t const&, gmx::ArrayRef<int const>, gmx_ga2la_t const&, gmx_domdec_zones_t const&, std::vector<gmx_molblock_t, std::allocator<gmx_molblock_t> > const&, bool, int const*, b... | Outermost | 0.00 | 0.01 | 0.02 | 0.01 | 0.02 | 0.01 | 0.01 | 0.02 | 0.02 | 0.00 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.03 | | 0.06 | 0.05 | 0.04 | 0.02 | 0.02 | 0.02 | 0.01 | 0.02 | | 0.07 | 0.06 | 0.05 | 0.03 | 0.03 | 0.03 | 0.01 | 0.02 | | 0.06 | 0.04 | 0.02 | 0.01 | 0.01 | 0.00 | 0.00 | 0.00 | | 0.07 | 0.05 | 0.03 | 0.02 | 0.01 | 0.01 | 0.00 | 0.00 | | 2 | 4 | 8 | 16 | 18 | 32 | 46 | 72 | 0 | 9.21 | 7.32 | 1 | 8.06 | 0 | 1.04 | 1.29 | 1.93 | 2.11 | 1.95 | 2.67 | 2.09 | 3.67 | NA | NA | NA | NA | NA | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
17116 | libgromacs_mpi.so.9.0.0 - vec.h:141-345 [...] | do_pairs(int, int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float const*, float*, gmx::ArrayRef<float const>, gmx::ArrayRef<float const>, gmx::ArrayRef<bool const>, gmx::ArrayRef<un... | Single | 0.14 | 0.13 | 0.11 | 0.10 | 0.10 | 0.07 | 0.05 | 0.02 | 0.02 | 0.14 | 0.13 | 0.11 | 0.10 | 0.10 | 0.07 | 0.05 | 0.02 | 0.02 | 1.12 | 0.76 | 0.38 | 0.26 | 0.16 | 0.15 | 0.09 | 0.02 | 0.02 | 1.12 | 0.76 | 0.38 | 0.26 | 0.16 | 0.15 | 0.09 | 0.02 | 0.02 | 1.12 | 0.59 | 0.26 | 0.15 | 0.08 | 0.03 | 0.02 | 0.00 | 0.00 | 1.12 | 0.59 | 0.26 | 0.15 | 0.08 | 0.03 | 0.02 | 0.00 | 0.00 | 1 | 2 | 4 | 8 | 16 | 19 | 33 | 39 | 58 | 13.48 | 8.9 | 1.55 | 1.27 | 6.97 | 1 | 1.3 | 1.45 | 1.66 | 2.16 | 2.58 | 2.75 | 2.64 | 2.49 | NA | NA | NA | NA | NA | 1 | 0 | 0.95 | 0.01 | 1.07 | 0 | 0.91 | 0.01 | 0.92 | 0.01 | 1.01 | -0 | 1.1 | -0 | 2.98 | 0 | 2.39 | 0 |
17460 | libgromacs_mpi.so.9.0.0 - pme_solve.cpp:456-469 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.05 | 0.05 | 0.05 | 0.04 | 0.04 | 0.02 | 0.02 | 0.02 | 0.02 | 0.05 | 0.05 | 0.05 | 0.04 | 0.04 | 0.02 | 0.02 | 0.02 | 0.02 | 0.44 | 0.21 | 0.13 | 0.08 | 0.05 | 0.04 | 0.04 | 0.03 | 0.02 | 0.44 | 0.21 | 0.13 | 0.08 | 0.05 | 0.04 | 0.04 | 0.03 | 0.02 | 0.44 | 0.21 | 0.12 | 0.06 | 0.03 | 0.01 | 0.01 | 0.00 | 0.00 | 0.44 | 0.21 | 0.12 | 0.06 | 0.03 | 0.01 | 0.01 | 0.00 | 0.00 | 1 | 2 | 4 | 8 | 16 | 12 | 23 | 37 | 51 | 5.88 | 7.35 | 1 | 1.5 | 8 | 1 | 1.04 | 1.09 | 1.28 | 1.76 | 1.44 | 2.38 | 2.91 | 2.83 | 0 | 7 | 0 | 0 | 0 | 1 | 0 | 1.06 | -0 | 0.93 | 0 | 0.88 | 0.01 | 0.88 | 0.01 | 1.17 | -0 | 1.01 | -0 | 0.97 | 0 | 0.97 | 0 |
17288 | libgromacs_mpi.so.9.0.0 - pme_grid.cpp:166-171 | gmx_sum_qgrid_dd(gmx_pme_t*, float*, int) | Innermost | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.03 | 0.02 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.03 | 0.02 | | | | | | | | 0.03 | 0.03 | | | | | | | | 0.03 | 0.03 | | | | | | | | 0.00 | 0.00 | | | | | | | | 0.00 | 0.00 | | | | | | | | 42 | 46 | 100 | 50 | 1 | 1 | 1.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.47 | 2.88 | 0 | 2 | 0 | 0 | 0 | | | | | | | | | | | | | | | 1 | 0 | 1 | 0 |
2633 | libgromacs_mpi.so.9.0.0 - simd_prune_kernel.cpp:106-213 [...] | void nbnxmSimdPruneKernel<(KernelLayout)1>(NbnxnPairlistCpu*, nbnxn_atomdata_t const&, gmx::ArrayRef<gmx::BasicVector<float> const>, float) | Outermost | 0.02 | 0.01 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.98 | 0.94 | 1.01 | 0.95 | 0.86 | 0.62 | 0.58 | 0.45 | 0.41 | 0.14 | 0.05 | 0.05 | 0.06 | 0.02 | 0.03 | 0.03 | 0.02 | 0.02 | 7.87 | 4.14 | 2.64 | 1.63 | 0.75 | 0.54 | 0.37 | 0.17 | 0.12 | 0.14 | 0.05 | 0.04 | 0.03 | 0.02 | 0.01 | 0.01 | 0.00 | 0.00 | 7.87 | 4.12 | 2.43 | 1.41 | 0.64 | 0.30 | 0.19 | 0.07 | 0.05 | 1 | 2 | 4 | 8 | 16 | 20 | 37 | 47 | 56 | 22.58 | 22.27 | 1.12 | 1 | 1.74 | 1 | 1.11 | 1.29 | 1.78 | 1.43 | 2.3 | 2.31 | 3.31 | 2.13 | 0.67 | 0.67 | 0 | 4 | 2 | 1 | 0 | 1.61 | 0 | 0.93 | 0 | 0.54 | 0.01 | 0.52 | 0.01 | 0.47 | 0.01 | 0.36 | 0.01 | 0.4 | 0.01 | 0.36 | 0.01 |
3179 | libgromacs_mpi.so.9.0.0 - domdec_specatomcomm.cpp:285-287 [...] | dd_move_x_specat(gmx_domdec_t const*, gmx_domdec_specat_comm_t*, float const (*) [3], gmx::BasicVector<float>*, gmx::BasicVector<float>*, bool) | Innermost | 0.00 | 0.00 | 0.01 | 0.05 | 0.03 | 0.01 | 0.01 | 0.02 | 0.02 | 0.00 | 0.00 | 0.01 | 0.05 | 0.03 | 0.01 | 0.01 | 0.02 | 0.02 | | | 0.04 | 0.12 | 0.04 | 0.04 | 0.02 | 0.01 | 0.01 | | | 0.04 | 0.12 | 0.04 | 0.04 | 0.02 | 0.01 | 0.01 | | | 0.04 | 0.08 | 0.02 | 0.01 | 0.00 | 0.00 | 0.00 | | | 0.04 | 0.08 | 0.02 | 0.01 | 0.00 | 0.00 | 0.00 | | | 4 | 8 | 16 | 18 | 34 | 45 | 59 | 0 | 9.38 | 1 | 1 | 7.11 | 0 | 0 | 1.29 | 1.56 | 1.7 | 3.2 | 1.7 | 2.11 | 2.24 | 0 | 0 | 2 | 0 | 0 | | | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
17448 | libgromacs_mpi.so.9.0.0 - pme_solve.cpp:533-542 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.05 | 0.04 | 0.04 | 0.04 | 0.03 | 0.03 | 0.02 | 0.02 | 0.02 | 0.05 | 0.04 | 0.04 | 0.04 | 0.03 | 0.03 | 0.02 | 0.02 | 0.02 | 0.44 | 0.21 | 0.11 | 0.06 | 0.04 | 0.05 | 0.03 | 0.02 | 0.02 | 0.44 | 0.21 | 0.11 | 0.06 | 0.04 | 0.05 | 0.03 | 0.02 | 0.02 | 0.44 | 0.19 | 0.09 | 0.05 | 0.02 | 0.01 | 0.01 | 0.00 | 0.00 | 0.44 | 0.19 | 0.09 | 0.05 | 0.02 | 0.01 | 0.01 | 0.00 | 0.00 | 1 | 2 | 4 | 8 | 16 | 12 | 22 | 34 | 48 | 93.33 | 93.75 | 1 | 1 | 1.1 | 1 | 1.11 | 1.26 | 1.22 | 2.09 | 1.53 | 1.86 | 2.39 | 2.46 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 1.16 | 0 | 1.2 | 0 | 1.03 | -0 | 1.27 | 0 | 1.02 | -0 | 1.24 | -0 | 1.22 | -0 | 1.12 | -0 |
17442 | libgromacs_mpi.so.9.0.0 - pme_solve.cpp:233-560 [...] | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Outermost | 0.05 | 0.05 | 0.05 | 0.05 | 0.05 | 0.03 | 0.02 | 0.02 | 0.02 | 0.44 | 0.41 | 0.37 | 0.32 | 0.31 | 0.24 | 0.17 | 0.19 | 0.17 | 0.43 | 0.27 | 0.13 | 0.10 | 0.05 | 0.06 | 0.04 | 0.03 | 0.02 | 3.53 | 1.89 | 0.98 | 0.53 | 0.28 | 0.35 | 0.20 | 0.13 | 0.12 | 0.43 | 0.24 | 0.12 | 0.07 | 0.03 | 0.02 | 0.01 | 0.00 | 0.00 | 3.53 | 1.81 | 0.89 | 0.48 | 0.23 | 0.12 | 0.06 | 0.03 | 0.02 | 1 | 2 | 4 | 8 | 16 | 12 | 24 | 37 | 45 | 34.38 | 38.36 | 1.79 | 1.02 | 1.35 | 1 | 1.14 | 1.13 | 1.32 | 1.61 | 1.61 | 1.92 | 2.61 | 2.5 | NA | NA | NA | NA | NA | 1 | 0 | 0.92 | 0 | 0.95 | 0 | 0.76 | 0.01 | 0.8 | 0.01 | 0.9 | 0 | 0.87 | 0 | 1.01 | -0 | 1.2 | -0 |
3184 | libgromacs_mpi.so.9.0.0 - domdec_specatomcomm.cpp:229-231 [...] | dd_move_x_specat(gmx_domdec_t const*, gmx_domdec_specat_comm_t*, float const (*) [3], gmx::BasicVector<float>*, gmx::BasicVector<float>*, bool) | Innermost | 0.00 | 0.00 | 0.02 | 0.07 | 0.03 | 0.01 | 0.02 | 0.01 | 0.02 | 0.00 | 0.00 | 0.02 | 0.07 | 0.03 | 0.01 | 0.02 | 0.01 | 0.02 | | | 0.13 | 0.15 | 0.04 | 0.02 | 0.02 | 0.01 | 0.02 | | | 0.13 | 0.15 | 0.04 | 0.02 | 0.02 | 0.01 | 0.02 | | | 0.06 | 0.10 | 0.02 | 0.01 | 0.00 | 0.00 | 0.00 | | | 0.06 | 0.10 | 0.02 | 0.01 | 0.00 | 0.00 | 0.00 | | | 4 | 8 | 15 | 17 | 30 | 37 | 51 | 0 | 9.9 | 1 | 1 | 6.15 | 0 | 0 | 2.4 | 1.44 | 1.96 | 1.79 | 2.38 | 2.18 | 2.15 | 0 | 1 | 1 | 1 | 0 | | | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
3181 | libgromacs_mpi.so.9.0.0 - domdec_specatomcomm.cpp:285-287 [...] | dd_move_x_specat(gmx_domdec_t const*, gmx_domdec_specat_comm_t*, float const (*) [3], gmx::BasicVector<float>*, gmx::BasicVector<float>*, bool) | Innermost | 0.00 | 0.00 | 0.02 | 0.04 | 0.03 | 0.01 | 0.01 | 0.01 | 0.01 | 0.00 | 0.00 | 0.02 | 0.04 | 0.03 | 0.01 | 0.01 | 0.01 | 0.01 | | | 0.06 | 0.09 | 0.04 | 0.03 | 0.01 | 0.02 | 0.02 | | | 0.06 | 0.09 | 0.04 | 0.03 | 0.01 | 0.02 | 0.02 | | | 0.05 | 0.05 | 0.02 | 0.01 | 0.00 | 0.00 | 0.00 | | | 0.05 | 0.05 | 0.02 | 0.01 | 0.00 | 0.00 | 0.00 | | | 4 | 8 | 16 | 15 | 26 | 36 | 52 | 0 | 9.38 | 1 | 1 | 7.11 | 0 | 0 | 1.23 | 1.67 | 1.75 | 2.05 | 1.77 | 3.27 | 2.97 | 0 | 0 | 2 | 0 | 0 | | | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
4253 | libgromacs_mpi.so.9.0.0 - threaded_force_buffer.cpp:78-78 [...] | gmx::ThreadForceBuffer<float [4]>::clearForcesAndEnergies() | Single | 0.13 | 0.13 | 0.15 | 0.17 | 0.12 | 0.06 | 0.02 | 0.02 | 0.01 | 0.13 | 0.13 | 0.15 | 0.17 | 0.12 | 0.06 | 0.02 | 0.02 | 0.01 | 1.00 | 0.59 | 0.38 | 0.34 | 0.19 | 0.10 | 0.03 | 0.01 | 0.02 | 1.00 | 0.59 | 0.38 | 0.34 | 0.19 | 0.10 | 0.03 | 0.01 | 0.02 | 1.00 | 0.57 | 0.36 | 0.26 | 0.09 | 0.03 | 0.01 | 0.00 | 0.00 | 1.00 | 0.57 | 0.36 | 0.26 | 0.09 | 0.03 | 0.01 | 0.00 | 0.00 | 1 | 2 | 4 | 8 | 16 | 19 | 33 | 42 | 47 | 100 | 50 | 1 | 1 | 2 | 1 | 1.03 | 1.06 | 1.33 | 2.08 | 2.16 | 2.63 | 1.8 | 2.69 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 0.88 | 0.02 | 0.7 | 0.04 | 0.49 | 0.09 | 0.69 | 0.04 | 1.09 | 0 | 2.28 | 0 | 2.83 | 0 | 2.85 | 0 |
2537 | libgromacs_mpi.so.9.0.0 - pairlist.cpp:1330-1430 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.68] | InBetween | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.01 | 0.13 | 0.12 | 0.13 | 0.13 | 0.11 | 0.08 | 0.08 | 0.08 | 0.07 | 0.14 | 0.07 | 0.06 | 0.05 | 0.02 | 0.04 | 0.02 | 0.02 | 0.01 | 1.07 | 0.64 | 0.35 | 0.24 | 0.13 | 0.11 | 0.10 | 0.05 | 0.04 | 0.14 | 0.08 | 0.05 | 0.03 | 0.01 | 0.01 | 0.01 | 0.00 | 0.00 | 1.07 | 0.53 | 0.30 | 0.19 | 0.08 | 0.04 | 0.03 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 16 | 20 | 34 | 54 | 47 | 0 | 7.81 | 1 | 1 | 5.89 | 1 | 1 | 1.12 | 1.8 | 1.68 | 2.46 | 2.39 | 2.67 | 2.52 | NA | NA | NA | NA | NA | 1 | 0 | 0.93 | 0 | 0.65 | 0.01 | 0.57 | 0.01 | 0.74 | 0 | 0.49 | 0.01 | 0.39 | 0.01 | 0.34 | 0.01 | 0.5 | 0.01 |
17453 | libgromacs_mpi.so.9.0.0 - pme_solve.cpp:498-510 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.03 | 0.02 | 0.02 | 0.01 | 0.01 | 0.02 | 0.02 | 0.01 | 0.01 | 0.03 | 0.02 | 0.02 | 0.01 | 0.01 | 0.02 | 0.02 | 0.01 | 0.01 | 0.26 | 0.11 | 0.06 | 0.04 | 0.02 | 0.03 | 0.03 | 0.01 | 0.01 | 0.26 | 0.11 | 0.06 | 0.04 | 0.02 | 0.03 | 0.03 | 0.01 | 0.01 | 0.26 | 0.10 | 0.05 | 0.02 | 0.01 | 0.01 | 0.01 | 0.00 | 0.00 | 0.26 | 0.10 | 0.05 | 0.02 | 0.01 | 0.01 | 0.01 | 0.00 | 0.00 | 1 | 2 | 4 | 8 | 16 | 12 | 23 | 25 | 38 | 100 | 90.32 | 1 | 1 | 1.11 | 1 | 1.12 | 1.24 | 1.6 | 1.83 | 1.47 | 2.06 | 1.7 | 2.15 | 0 | 6 | 0 | 0 | 0 | 1 | 0 | 1.27 | 0 | 1.24 | 0 | 1.49 | 0 | 1.48 | 0 | 0.91 | 0 | 0.77 | 0 | 1.16 | -0 | 0.97 | 0 |
2571 | libgromacs_mpi.so.9.0.0 - pairlist.cpp:2082-2096 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.68] | Innermost | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.01 | 0.01 | 0.01 | 0.01 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.01 | 0.01 | 0.01 | 0.01 | 0.19 | 0.13 | 0.07 | 0.06 | 0.02 | 0.03 | 0.02 | 0.01 | 0.02 | 0.19 | 0.13 | 0.07 | 0.06 | 0.02 | 0.03 | 0.02 | 0.01 | 0.02 | 0.18 | 0.10 | 0.05 | 0.04 | 0.01 | 0.01 | 0.00 | 0.00 | 0.00 | 0.18 | 0.10 | 0.05 | 0.04 | 0.01 | 0.01 | 0.00 | 0.00 | 0.00 | 1 | 2 | 4 | 8 | 14 | 16 | 34 | 32 | 41 | 0 | 6.56 | 1 | 1 | 7.69 | 1 | 1.25 | 1.3 | 1.66 | 1.37 | 2.49 | 2.23 | 1.56 | 2.46 | NA | NA | NA | NA | NA | 1 | 0 | 0.92 | 0 | 0.86 | 0 | 0.64 | 0.01 | 0.9 | 0 | 0.82 | 0 | 0.61 | 0.01 | 0.89 | 0 | 0.73 | 0 |
17317 | libgromacs_mpi.so.9.0.0 - pme_grid.cpp:469-471 | wrap_periodic_pmegrid(gmx_pme_t const*, float*) | Innermost | 0.02 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.02 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.14 | | | | | | | | | 0.14 | | | | | | | | | 0.13 | | | | | | | | | 0.13 | | | | | | | | | 1 | | | | | | | | | 0 | 6.25 | 1 | 1 | 9.6 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | | | | | | | | | | | | | | | | |
3170 | libgromacs_mpi.so.9.0.0 - domdec_specatomcomm.cpp:351-353 | dd_move_x_specat(gmx_domdec_t const*, gmx_domdec_specat_comm_t*, float const (*) [3], gmx::BasicVector<float>*, gmx::BasicVector<float>*, bool) | Innermost | 0.00 | 0.01 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.01 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | | 0.05 | | | | | | | | | 0.05 | | | | | | | | | 0.05 | | | | | | | | | 0.05 | | | | | | | | | 2 | | | | | | | | 0 | 9.38 | 1 | 1 | 7.11 | 0 | 1.05 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | | | 1 | 0 | | | | | | | | | | | | | | |
3271 | libgromacs_mpi.so.9.0.0 - localtopology.cpp:749-751 [...] | void make_exclusions_zone<true>(gmx::ArrayRef<int const>, gmx_ga2la_t const&, gmx_domdec_zones_t const&, gmx::ArrayRef<MolblockIndices const>, std::vector<gmx_moltype_t, std::allocator<gmx_moltype_t> > const&, gmx:... | InBetween | 0.03 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.03 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.24 | | | | | | | | | 0.24 | | | | | | | | | 0.25 | | | | | | | | | 0.25 | | | | | | | | | 1 | | | | | | | | | 0 | 11.31 | 1 | 1 | 11.62 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | 1 | 0 | | | | | | | | | | | | | | | | |
3175 | libgromacs_mpi.so.9.0.0 - domdec_specatomcomm.cpp:320-322 [...] | dd_move_x_specat(gmx_domdec_t const*, gmx_domdec_specat_comm_t*, float const (*) [3], gmx::BasicVector<float>*, gmx::BasicVector<float>*, bool) | Innermost | 0.00 | 0.03 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.03 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | | 0.13 | | | | | | | | | 0.13 | | | | | | | | | 0.13 | | | | | | | | | 0.13 | | | | | | | | | 2 | | | | | | | | 0 | 9.9 | 1 | 1 | 6.15 | 0 | 1.02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | | | 1 | 0 | | | | | | | | | | | | | | |
3279 | libgromacs_mpi.so.9.0.0 - localtopology.cpp:417-577 [...] | int assignInteractionsForAtom<true>(AtomIndexSet const&, reverse_ilist_t const&, gmx_ga2la_t const&, gmx_domdec_zones_t const&, bool, int const*, bool, float, t_pbc const*, gmx::ArrayRef<gmx::BasicVector<float> const>, Int... | Outermost | 0.02 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.05 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.17 | | | | | | | | | 0.41 | | | | | | | | | 0.17 | | | | | | | | | 0.41 | | | | | | | | | 1 | | | | | | | | | 15.38 | 12.77 | 3.65 | 1 | 6.5 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | 1 | 0 | | | | | | | | | | | | | | | | |
3284 | libgromacs_mpi.so.9.0.0 - localtopology.cpp:417-514 [...] | int assignInteractionsForAtom<true>(AtomIndexSet const&, reverse_ilist_t const&, gmx_ga2la_t const&, gmx_domdec_zones_t const&, bool, int const*, bool, float, t_pbc const*, gmx::ArrayRef<gmx::BasicVector<float> const>, Int... | Innermost | 0.02 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.02 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.20 | | | | | | | | | 0.20 | | | | | | | | | 0.20 | | | | | | | | | 0.20 | | | | | | | | | 1 | | | | | | | | | 90 | 43.75 | 1.06 | 1 | 3.2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 1 | 1 | 0 | | | | | | | | | | | | | | | | |
17420 | libgromacs_mpi.so.9.0.0 - pme_redistribute.cpp:436-449 [...] | dd_pmeredist_f(gmx_pme_t*, PmeAtomComm*, gmx::ArrayRef<gmx::BasicVector<float> >, bool) | Single | 0.00 | 0.17 | 0.23 | 0.27 | 0.29 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.17 | 0.23 | 0.27 | 0.29 | 0.00 | 0.00 | 0.00 | 0.00 | | 0.81 | 0.59 | 0.46 | 0.31 | | | | | | 0.81 | 0.59 | 0.46 | 0.31 | | | | | | 0.75 | 0.55 | 0.40 | 0.22 | | | | | | 0.75 | 0.55 | 0.40 | 0.22 | | | | | | 2 | 4 | 8 | 16 | | | | | 22.22 | 11.11 | 1.44 | 1.43 | 5.49 | 0 | 1.07 | 1.08 | 1.16 | 1.46 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1.5 | 1 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | | | | | | | | |
17329 | libgromacs_mpi.so.9.0.0 - pme_grid.cpp:502-504 | unwrap_periodic_pmegrid(gmx_pme_t*, float*) | Innermost | 0.01 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.01 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.11 | | | | | | | | | 0.11 | | | | | | | | | 0.11 | | | | | | | | | 0.11 | | | | | | | | | 1 | | | | | | | | | 0 | 6.25 | 1 | 1 | 10.67 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | | | | | | | | | | | | | | | | |
3172 | libgromacs_mpi.so.9.0.0 - domdec_specatomcomm.cpp:320-322 [...] | dd_move_x_specat(gmx_domdec_t const*, gmx_domdec_specat_comm_t*, float const (*) [3], gmx::BasicVector<float>*, gmx::BasicVector<float>*, bool) | Innermost | 0.00 | 0.01 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.01 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | | 0.05 | | | | | | | | | 0.05 | | | | | | | | | 0.05 | | | | | | | | | 0.05 | | | | | | | | | 2 | | | | | | | | 0 | 9.9 | 1 | 1 | 6.15 | 0 | 1.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | | | 1 | 0 | | | | | | | | | | | | | | |