options

Executable Output


* Info: Detected 2 Lprof instances in ins01.benchmarkcenter.megware.com: processes-per-node/ppn set accordingly.
If this is incorrect, rerun with an explicit value for this setting

* Info: Selecting the 'perf-high-ppn' engine for node ins01.benchmarkcenter.megware.com

* Info: "ref-cycles" not supported on ins01.benchmarkcenter.megware.com: fallback to "cpu-clock"
* Warning: Found no event able to derive walltime: prepending cpu-clock
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 123839)
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 123843)Wed Feb 21 16:46:52 2024: Starting Initialization


Mini-Application Name    : CoMD-openmp-mpi
Mini-Application Version : 1.1
Platform:
  hostname: gmz16.benchmarkcenter.megware.com
  kernel name: 'Linux'
  kernel release: '5.14.0-362.13.1.el9_3.x86_64'
  processor: 'x86_64'
Build:
  CC: '/cluster/intel/oneapi/2024.0.0/mpi/2021.11/bin/mpiicc'
  compiler version: 'unknown'
  CFLAGS: '-O3 -march=native -DDO_MPI -O3 -march=haswell -fno-tree-vectorize -fno-openmp-simd -funroll-loops -ffast-math -g -grecord-gcc-switches -fno-omit-frame-pointer -fcf-protection=none -no-pie -cc=gcc -fopenmp -funroll-loops'
  LDFLAGS: ' '
  using MPI: true
  Threading: OpenMP (1 threads) 
  Double Precision: true
Run Date/Time: 2024-02-21, 16:46:52

Command Line Parameters:
  doeam: 0
  potDir: pots
  potName: Cu_u6.eam
  potType: funcfl
  nx: 100
  ny: 100
  nz: 100
  xproc: 2
  yproc: 1
  zproc: 1
  Lattice constant: -1 Angstroms
  nSteps: 100
  printRate: 10
  Time step: 1 fs
  Initial Temperature: 600 K
  Initial Delta: 0 Angstroms

Simulation data: 
  Total atoms        : 4000000
  Min global bounds  : [   0.0000000000,   0.0000000000,   0.0000000000 ]
  Max global bounds  : [ 361.5000000000, 361.5000000000, 361.5000000000 ]

Decomposition data: 
  Processors         :      2,     1,     1
  Local boxes        :     31,    62,    62 =   119164
  Box size           : [   5.8306451613,   5.8306451613,   5.8306451613 ]
  Box factor         : [   1.0074548875,   1.0074548875,   1.0074548875 ] 
  Max Link Cell Occupancy: 32 of 64

Potential data: 
  Potential type   : Lennard-Jones
  Species name     : Cu
  Atomic number    : 29
  Mass             : 63.55 amu
  Lattice Type     : FCC
  Lattice spacing  : 3.615 Angstroms
  Cutoff           : 5.7875 Angstroms
  Epsilon          : 0.167 eV
  Sigma            : 2.315 Angstroms


Initial energy : -1.166063303588, atom count : 4000000 

Wed Feb 21 16:46:54 2024: Initialization Finished

Wed Feb 21 16:46:54 2024: Starting simulation

#                                                                                         Performance
#  Loop   Time(fs)       Total Energy   Potential Energy     Kinetic Energy  Temperature   (us/atom)     # Atoms
      0       0.00    -1.166063303588    -1.243619295188     0.077555991600     600.0000     0.0000      4000000
     10      10.00    -1.166059650499    -1.233157709948     0.067098059449     519.0938     0.9948      4000000
     20      20.00    -1.166048438417    -1.208183014318     0.042134575902     325.9677     1.3394      4000000
     30      30.00    -1.166037590737    -1.186586197151     0.020548606414     158.9711     1.4567      4000000
     40      40.00    -1.166042093135    -1.183625399859     0.017583306724     136.0305     1.4931      4000000
     50      50.00    -1.166051684893    -1.193713710258     0.027662025365     214.0030     1.5033      4000000
     60      60.00    -1.166054646931    -1.202662201513     0.036607554582     283.2087     1.5027      4000000
     70      70.00    -1.166052143011    -1.204911990844     0.038859847833     300.6332     1.4977      4000000
     80      80.00    -1.166048803912    -1.203635015020     0.037586211108     290.7799     1.4893      4000000
     90      90.00    -1.166048006780    -1.203820491598     0.037772484818     292.2210     1.4821      4000000
    100     100.00    -1.166049793505    -1.206862845061     0.040813051556     315.7439     1.4749      4000000
Wed Feb 21 16:51:39 2024: Ending simulation



Simulation Validation:
  Initial energy  : -1.166063303588
  Final energy    : -1.166049793505
  eFinal/eInitial : 0.999988
  Final atom count : 4000000, no atoms lost


Timings for Rank 0
        Timer        # Calls    Avg/Call (s)   Total (s)    % Loop
___________________________________________________________________
total                      1     286.8737      286.8737      100.77
loop                       1     284.6838      284.6838      100.00
timestep                  10      28.4683      284.6832      100.00
  position               100       0.0188        1.8794        0.66
  velocity               200       0.0173        3.4692        1.22
  redistribute           101       0.0913        9.2244        3.24
    atomHalo             101       0.0096        0.9671        0.34
  force                  101       2.6900      271.6894       95.44
commHalo                 303       0.0005        0.1487        0.05
commReduce                39       0.0001        0.0024        0.00

Timing Statistics Across 2 Ranks:
        Timer        Rank: Min(s)       Rank: Max(s)      Avg(s)    Stdev(s)
_____________________________________________________________________________
total                0:  286.8737       1:  286.8739    286.8738      0.0001
loop                 0:  284.6838       1:  284.6838    284.6838      0.0000
timestep             0:  284.6832       1:  284.6834    284.6833      0.0001
  position           1:    1.8543       0:    1.8794      1.8669      0.0125
  velocity           1:    3.4367       0:    3.4692      3.4530      0.0162
  redistribute       0:    9.2244       1:    9.5460      9.3852      0.1608
    atomHalo         0:    0.9671       1:    1.2915      1.1293      0.1622
  force              1:  271.3855       0:  271.6894    271.5375      0.1520
commHalo             0:    0.1487       1:    0.4825      0.3156      0.1669
commReduce           0:    0.0024       1:    0.0454      0.0239      0.0215

---------------------------------------------------
 Average atom update rate:       1.42 us/atom/task
---------------------------------------------------


---------------------------------------------------
 Average all atom update rate:   0.71 us/atom
---------------------------------------------------


---------------------------------------------------
 Average atom rate:              1.41 atoms/us
---------------------------------------------------

Wed Feb 21 16:51:39 2024: CoMD Ending


* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 123839)
* Warning: (host ins01.benchmarkcenter.megware.com, process 123839) Observed more threads (2) than expected (1): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=2.

* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 123843)
* Warning: (host ins01.benchmarkcenter.megware.com, process 123843) Observed more threads (2) than expected (1): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=2.


Your experiment path is /beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_0

To display your profiling results:
##################################################################################################################################################################################################
#    LEVEL    |     REPORT     |                                                                             COMMAND                                                                             #
##################################################################################################################################################################################################
#  Functions  |  Cluster-wide  |  maqao lprof -df xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_0      #
#  Functions  |  Per-node      |  maqao lprof -df -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_0  #
#  Functions  |  Per-process   |  maqao lprof -df -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_0  #
#  Functions  |  Per-thread    |  maqao lprof -df -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_0  #
#  Loops      |  Cluster-wide  |  maqao lprof -dl xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_0      #
#  Loops      |  Per-node      |  maqao lprof -dl -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_0  #
#  Loops      |  Per-process   |  maqao lprof -dl -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_0  #
#  Loops      |  Per-thread    |  maqao lprof -dl -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_0  #
##################################################################################################################################################################################################


* Info: Detected 2 Lprof instances in ins01.benchmarkcenter.megware.com: processes-per-node/ppn set accordingly.
If this is incorrect, rerun with an explicit value for this setting

* Info: Selecting the 'perf-high-ppn' engine for node ins01.benchmarkcenter.megware.com

* Info: "ref-cycles" not supported on ins01.benchmarkcenter.megware.com: fallback to "cpu-clock"
* Warning: Found no event able to derive walltime: prepending cpu-clock
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 123985)
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 123986)Wed Feb 21 16:51:49 2024: Starting Initialization


Mini-Application Name    : CoMD-openmp-mpi
Mini-Application Version : 1.1
Platform:
  hostname: gmz16.benchmarkcenter.megware.com
  kernel name: 'Linux'
  kernel release: '5.14.0-362.13.1.el9_3.x86_64'
  processor: 'x86_64'
Build:
  CC: '/cluster/intel/oneapi/2024.0.0/mpi/2021.11/bin/mpiicc'
  compiler version: 'unknown'
  CFLAGS: '-O3 -march=native -DDO_MPI -O3 -march=haswell -fno-tree-vectorize -fno-openmp-simd -funroll-loops -ffast-math -g -grecord-gcc-switches -fno-omit-frame-pointer -fcf-protection=none -no-pie -cc=gcc -fopenmp -funroll-loops'
  LDFLAGS: ' '
  using MPI: true
  Threading: OpenMP (2 threads) 
  Double Precision: true
Run Date/Time: 2024-02-21, 16:51:49

Command Line Parameters:
  doeam: 0
  potDir: pots
  potName: Cu_u6.eam
  potType: funcfl
  nx: 100
  ny: 100
  nz: 100
  xproc: 2
  yproc: 1
  zproc: 1
  Lattice constant: -1 Angstroms
  nSteps: 100
  printRate: 10
  Time step: 1 fs
  Initial Temperature: 600 K
  Initial Delta: 0 Angstroms

Simulation data: 
  Total atoms        : 4000000
  Min global bounds  : [   0.0000000000,   0.0000000000,   0.0000000000 ]
  Max global bounds  : [ 361.5000000000, 361.5000000000, 361.5000000000 ]

Decomposition data: 
  Processors         :      2,     1,     1
  Local boxes        :     31,    62,    62 =   119164
  Box size           : [   5.8306451613,   5.8306451613,   5.8306451613 ]
  Box factor         : [   1.0074548875,   1.0074548875,   1.0074548875 ] 
  Max Link Cell Occupancy: 32 of 64

Potential data: 
  Potential type   : Lennard-Jones
  Species name     : Cu
  Atomic number    : 29
  Mass             : 63.55 amu
  Lattice Type     : FCC
  Lattice spacing  : 3.615 Angstroms
  Cutoff           : 5.7875 Angstroms
  Epsilon          : 0.167 eV
  Sigma            : 2.315 Angstroms


Initial energy : -1.166063304092, atom count : 4000000 

Wed Feb 21 16:51:50 2024: Initialization Finished

Wed Feb 21 16:51:50 2024: Starting simulation

#                                                                                         Performance
#  Loop   Time(fs)       Total Energy   Potential Energy     Kinetic Energy  Temperature   (us/atom)     # Atoms
      0       0.00    -1.166063304092    -1.243619295692     0.077555991600     600.0000     0.0000      4000000
     10      10.00    -1.166059650500    -1.233157709949     0.067098059449     519.0938     0.5077      4000000
     20      20.00    -1.166048438416    -1.208183014318     0.042134575902     325.9677     0.6793      4000000
     30      30.00    -1.166037590737    -1.186586197151     0.020548606414     158.9711     0.7385      4000000
     40      40.00    -1.166042093134    -1.183625399859     0.017583306724     136.0305     0.7569      4000000
     50      50.00    -1.166051684893    -1.193713710258     0.027662025365     214.0030     0.7617      4000000
     60      60.00    -1.166054646931    -1.202662201513     0.036607554582     283.2087     0.7611      4000000
     70      70.00    -1.166052143011    -1.204911990844     0.038859847833     300.6332     0.7589      4000000
     80      80.00    -1.166048803912    -1.203635015020     0.037586211108     290.7799     0.7553      4000000
     90      90.00    -1.166048006780    -1.203820491599     0.037772484818     292.2210     0.7518      4000000
    100     100.00    -1.166049793504    -1.206862845060     0.040813051556     315.7439     0.7470      4000000
Wed Feb 21 16:54:15 2024: Ending simulation



Simulation Validation:
  Initial energy  : -1.166063304092
  Final energy    : -1.166049793504
  eFinal/eInitial : 0.999988
  Final atom count : 4000000, no atoms lost


Timings for Rank 0
        Timer        # Calls    Avg/Call (s)   Total (s)    % Loop
___________________________________________________________________
total                      1     145.5634      145.5634      100.83
loop                       1     144.3647      144.3647      100.00
timestep                  10      14.4364      144.3641      100.00
  position               100       0.0090        0.9021        0.62
  velocity               200       0.0085        1.7015        1.18
  redistribute           101       0.0662        6.6827        4.63
    atomHalo             101       0.0099        1.0016        0.69
  force                  101       1.3453      135.8771       94.12
commHalo                 303       0.0006        0.1833        0.13
commReduce                39       0.0004        0.0149        0.01

Timing Statistics Across 2 Ranks:
        Timer        Rank: Min(s)       Rank: Max(s)      Avg(s)    Stdev(s)
_____________________________________________________________________________
total                0:  145.5634       1:  145.5637    145.5636      0.0002
loop                 0:  144.3647       1:  144.3647    144.3647      0.0000
timestep             0:  144.3641       1:  144.3643    144.3642      0.0001
  position           1:    0.8960       0:    0.9021      0.8990      0.0031
  velocity           0:    1.7015       1:    1.7040      1.7027      0.0013
  redistribute       1:    6.6331       0:    6.6827      6.6579      0.0248
    atomHalo         0:    1.0016       1:    1.0189      1.0103      0.0087
  force              0:  135.8771       1:  135.9363    135.9067      0.0296
commHalo             0:    0.1833       1:    0.1984      0.1908      0.0076
commReduce           1:    0.0066       0:    0.0149      0.0107      0.0041

---------------------------------------------------
 Average atom update rate:       0.72 us/atom/task
---------------------------------------------------


---------------------------------------------------
 Average all atom update rate:   0.36 us/atom
---------------------------------------------------


---------------------------------------------------
 Average atom rate:              2.77 atoms/us
---------------------------------------------------

Wed Feb 21 16:54:15 2024: CoMD Ending


* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 123985)
* Warning: (host ins01.benchmarkcenter.megware.com, process 123985) Observed more threads (3) than expected (2): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=3.

* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 123986)
* Warning: (host ins01.benchmarkcenter.megware.com, process 123986) Observed more threads (3) than expected (2): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=3.


Your experiment path is /beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_1

To display your profiling results:
##################################################################################################################################################################################################
#    LEVEL    |     REPORT     |                                                                             COMMAND                                                                             #
##################################################################################################################################################################################################
#  Functions  |  Cluster-wide  |  maqao lprof -df xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_1      #
#  Functions  |  Per-node      |  maqao lprof -df -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_1  #
#  Functions  |  Per-process   |  maqao lprof -df -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_1  #
#  Functions  |  Per-thread    |  maqao lprof -df -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_1  #
#  Loops      |  Cluster-wide  |  maqao lprof -dl xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_1      #
#  Loops      |  Per-node      |  maqao lprof -dl -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_1  #
#  Loops      |  Per-process   |  maqao lprof -dl -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_1  #
#  Loops      |  Per-thread    |  maqao lprof -dl -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_1  #
##################################################################################################################################################################################################


* Info: Detected 2 Lprof instances in ins01.benchmarkcenter.megware.com: processes-per-node/ppn set accordingly.
If this is incorrect, rerun with an explicit value for this setting

* Info: Selecting the 'perf-high-ppn' engine for node ins01.benchmarkcenter.megware.com

* Info: "ref-cycles" not supported on ins01.benchmarkcenter.megware.com: fallback to "cpu-clock"
* Warning: Found no event able to derive walltime: prepending cpu-clock
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 124102)
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 124101)Wed Feb 21 16:54:26 2024: Starting Initialization


Mini-Application Name    : CoMD-openmp-mpi
Mini-Application Version : 1.1
Platform:
  hostname: gmz16.benchmarkcenter.megware.com
  kernel name: 'Linux'
  kernel release: '5.14.0-362.13.1.el9_3.x86_64'
  processor: 'x86_64'
Build:
  CC: '/cluster/intel/oneapi/2024.0.0/mpi/2021.11/bin/mpiicc'
  compiler version: 'unknown'
  CFLAGS: '-O3 -march=native -DDO_MPI -O3 -march=haswell -fno-tree-vectorize -fno-openmp-simd -funroll-loops -ffast-math -g -grecord-gcc-switches -fno-omit-frame-pointer -fcf-protection=none -no-pie -cc=gcc -fopenmp -funroll-loops'
  LDFLAGS: ' '
  using MPI: true
  Threading: OpenMP (4 threads) 
  Double Precision: true
Run Date/Time: 2024-02-21, 16:54:26

Command Line Parameters:
  doeam: 0
  potDir: pots
  potName: Cu_u6.eam
  potType: funcfl
  nx: 100
  ny: 100
  nz: 100
  xproc: 2
  yproc: 1
  zproc: 1
  Lattice constant: -1 Angstroms
  nSteps: 100
  printRate: 10
  Time step: 1 fs
  Initial Temperature: 600 K
  Initial Delta: 0 Angstroms

Simulation data: 
  Total atoms        : 4000000
  Min global bounds  : [   0.0000000000,   0.0000000000,   0.0000000000 ]
  Max global bounds  : [ 361.5000000000, 361.5000000000, 361.5000000000 ]

Decomposition data: 
  Processors         :      2,     1,     1
  Local boxes        :     31,    62,    62 =   119164
  Box size           : [   5.8306451613,   5.8306451613,   5.8306451613 ]
  Box factor         : [   1.0074548875,   1.0074548875,   1.0074548875 ] 
  Max Link Cell Occupancy: 32 of 64

Potential data: 
  Potential type   : Lennard-Jones
  Species name     : Cu
  Atomic number    : 29
  Mass             : 63.55 amu
  Lattice Type     : FCC
  Lattice spacing  : 3.615 Angstroms
  Cutoff           : 5.7875 Angstroms
  Epsilon          : 0.167 eV
  Sigma            : 2.315 Angstroms


Initial energy : -1.166063303067, atom count : 4000000 

Wed Feb 21 16:54:27 2024: Initialization Finished

Wed Feb 21 16:54:27 2024: Starting simulation

#                                                                                         Performance
#  Loop   Time(fs)       Total Energy   Potential Energy     Kinetic Energy  Temperature   (us/atom)     # Atoms
      0       0.00    -1.166063303067    -1.243619294667     0.077555991600     600.0000     0.0000      4000000
     10      10.00    -1.166059650499    -1.233157709949     0.067098059449     519.0938     0.2658      4000000
     20      20.00    -1.166048438416    -1.208183014318     0.042134575902     325.9677     0.3507      4000000
     30      30.00    -1.166037590737    -1.186586197151     0.020548606414     158.9711     0.3808      4000000
     40      40.00    -1.166042093134    -1.183625399859     0.017583306724     136.0305     0.3895      4000000
     50      50.00    -1.166051684893    -1.193713710257     0.027662025365     214.0030     0.3917      4000000
     60      60.00    -1.166054646931    -1.202662201513     0.036607554582     283.2087     0.3915      4000000
     70      70.00    -1.166052143011    -1.204911990845     0.038859847833     300.6332     0.3902      4000000
     80      80.00    -1.166048803912    -1.203635015020     0.037586211108     290.7799     0.3883      4000000
     90      90.00    -1.166048006780    -1.203820491599     0.037772484818     292.2210     0.3867      4000000
    100     100.00    -1.166049793504    -1.206862845060     0.040813051556     315.7439     0.3844      4000000
Wed Feb 21 16:55:41 2024: Ending simulation



Simulation Validation:
  Initial energy  : -1.166063303067
  Final energy    : -1.166049793504
  eFinal/eInitial : 0.999988
  Final atom count : 4000000, no atoms lost


Timings for Rank 0
        Timer        # Calls    Avg/Call (s)   Total (s)    % Loop
___________________________________________________________________
total                      1      75.1050       75.1050      100.96
loop                       1      74.3920       74.3920      100.00
timestep                  10       7.4391       74.3914      100.00
  position               100       0.0050        0.4979        0.67
  velocity               200       0.0045        0.9075        1.22
  redistribute           101       0.0509        5.1393        6.91
    atomHalo             101       0.0096        0.9734        1.31
  force                  101       0.6760       68.2780       91.78
commHalo                 303       0.0005        0.1556        0.21
commReduce                39       0.0002        0.0091        0.01

Timing Statistics Across 2 Ranks:
        Timer        Rank: Min(s)       Rank: Max(s)      Avg(s)    Stdev(s)
_____________________________________________________________________________
total                0:   75.1050       1:   75.1054     75.1052      0.0002
loop                 0:   74.3920       1:   74.3920     74.3920      0.0000
timestep             0:   74.3914       1:   74.3916     74.3915      0.0001
  position           1:    0.4375       0:    0.4979      0.4677      0.0302
  velocity           1:    0.8019       0:    0.9075      0.8547      0.0528
  redistribute       0:    5.1393       1:    5.4131      5.2762      0.1369
    atomHalo         0:    0.9734       1:    1.0962      1.0348      0.0614
  force              1:   68.1677       0:   68.2780     68.2228      0.0551
commHalo             0:    0.1556       1:    0.2784      0.2170      0.0614
commReduce           0:    0.0091       1:    0.0166      0.0128      0.0038

---------------------------------------------------
 Average atom update rate:       0.37 us/atom/task
---------------------------------------------------


---------------------------------------------------
 Average all atom update rate:   0.19 us/atom
---------------------------------------------------


---------------------------------------------------
 Average atom rate:              5.38 atoms/us
---------------------------------------------------

Wed Feb 21 16:55:41 2024: CoMD Ending


* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 124101)
* Warning: (host ins01.benchmarkcenter.megware.com, process 124101) Observed more threads (5) than expected (4): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=5.

* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 124102)
* Warning: (host ins01.benchmarkcenter.megware.com, process 124102) Observed more threads (5) than expected (4): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=5.


Your experiment path is /beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_2

To display your profiling results:
##################################################################################################################################################################################################
#    LEVEL    |     REPORT     |                                                                             COMMAND                                                                             #
##################################################################################################################################################################################################
#  Functions  |  Cluster-wide  |  maqao lprof -df xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_2      #
#  Functions  |  Per-node      |  maqao lprof -df -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_2  #
#  Functions  |  Per-process   |  maqao lprof -df -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_2  #
#  Functions  |  Per-thread    |  maqao lprof -df -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_2  #
#  Loops      |  Cluster-wide  |  maqao lprof -dl xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_2      #
#  Loops      |  Per-node      |  maqao lprof -dl -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_2  #
#  Loops      |  Per-process   |  maqao lprof -dl -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_2  #
#  Loops      |  Per-thread    |  maqao lprof -dl -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_2  #
##################################################################################################################################################################################################


* Info: Detected 2 Lprof instances in ins01.benchmarkcenter.megware.com: processes-per-node/ppn set accordingly.
If this is incorrect, rerun with an explicit value for this setting

* Info: Selecting the 'perf-high-ppn' engine for node ins01.benchmarkcenter.megware.com

* Info: "ref-cycles" not supported on ins01.benchmarkcenter.megware.com: fallback to "cpu-clock"
* Warning: Found no event able to derive walltime: prepending cpu-clock
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 124208)
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 124209)Wed Feb 21 16:55:52 2024: Starting Initialization


Mini-Application Name    : CoMD-openmp-mpi
Mini-Application Version : 1.1
Platform:
  hostname: gmz16.benchmarkcenter.megware.com
  kernel name: 'Linux'
  kernel release: '5.14.0-362.13.1.el9_3.x86_64'
  processor: 'x86_64'
Build:
  CC: '/cluster/intel/oneapi/2024.0.0/mpi/2021.11/bin/mpiicc'
  compiler version: 'unknown'
  CFLAGS: '-O3 -march=native -DDO_MPI -O3 -march=haswell -fno-tree-vectorize -fno-openmp-simd -funroll-loops -ffast-math -g -grecord-gcc-switches -fno-omit-frame-pointer -fcf-protection=none -no-pie -cc=gcc -fopenmp -funroll-loops'
  LDFLAGS: ' '
  using MPI: true
  Threading: OpenMP (8 threads) 
  Double Precision: true
Run Date/Time: 2024-02-21, 16:55:52

Command Line Parameters:
  doeam: 0
  potDir: pots
  potName: Cu_u6.eam
  potType: funcfl
  nx: 100
  ny: 100
  nz: 100
  xproc: 2
  yproc: 1
  zproc: 1
  Lattice constant: -1 Angstroms
  nSteps: 100
  printRate: 10
  Time step: 1 fs
  Initial Temperature: 600 K
  Initial Delta: 0 Angstroms

Simulation data: 
  Total atoms        : 4000000
  Min global bounds  : [   0.0000000000,   0.0000000000,   0.0000000000 ]
  Max global bounds  : [ 361.5000000000, 361.5000000000, 361.5000000000 ]

Decomposition data: 
  Processors         :      2,     1,     1
  Local boxes        :     31,    62,    62 =   119164
  Box size           : [   5.8306451613,   5.8306451613,   5.8306451613 ]
  Box factor         : [   1.0074548875,   1.0074548875,   1.0074548875 ] 
  Max Link Cell Occupancy: 32 of 64

Potential data: 
  Potential type   : Lennard-Jones
  Species name     : Cu
  Atomic number    : 29
  Mass             : 63.55 amu
  Lattice Type     : FCC
  Lattice spacing  : 3.615 Angstroms
  Cutoff           : 5.7875 Angstroms
  Epsilon          : 0.167 eV
  Sigma            : 2.315 Angstroms


Initial energy : -1.166063303663, atom count : 4000000 

Wed Feb 21 16:55:52 2024: Initialization Finished

Wed Feb 21 16:55:52 2024: Starting simulation

#                                                                                         Performance
#  Loop   Time(fs)       Total Energy   Potential Energy     Kinetic Energy  Temperature   (us/atom)     # Atoms
      0       0.00    -1.166063303663    -1.243619295263     0.077555991600     600.0000     0.0000      4000000
     10      10.00    -1.166059650500    -1.233157709949     0.067098059449     519.0938     0.1503      4000000
     20      20.00    -1.166048438416    -1.208183014318     0.042134575902     325.9677     0.1928      4000000
     30      30.00    -1.166037590737    -1.186586197151     0.020548606414     158.9711     0.2060      4000000
     40      40.00    -1.166042093134    -1.183625399859     0.017583306724     136.0305     0.2097      4000000
     50      50.00    -1.166051684893    -1.193713710258     0.027662025365     214.0030     0.2115      4000000
     60      60.00    -1.166054646931    -1.202662201513     0.036607554582     283.2087     0.2112      4000000
     70      70.00    -1.166052143011    -1.204911990845     0.038859847833     300.6332     0.2102      4000000
     80      80.00    -1.166048803912    -1.203635015020     0.037586211108     290.7799     0.2098      4000000
     90      90.00    -1.166048006780    -1.203820491599     0.037772484818     292.2210     0.2087      4000000
    100     100.00    -1.166049793504    -1.206862845060     0.040813051556     315.7439     0.2072      4000000
Wed Feb 21 16:56:33 2024: Ending simulation



Simulation Validation:
  Initial energy  : -1.166063303663
  Final energy    : -1.166049793504
  eFinal/eInitial : 0.999988
  Final atom count : 4000000, no atoms lost


Timings for Rank 0
        Timer        # Calls    Avg/Call (s)   Total (s)    % Loop
___________________________________________________________________
total                      1      40.8447       40.8447      101.23
loop                       1      40.3479       40.3479      100.00
timestep                  10       4.0347       40.3473      100.00
  position               100       0.0032        0.3202        0.79
  velocity               200       0.0030        0.5985        1.48
  redistribute           101       0.0472        4.7711       11.82
    atomHalo             101       0.0133        1.3479        3.34
  force                  101       0.3450       34.8429       86.36
commHalo                 303       0.0017        0.5154        1.28
commReduce                39       0.0022        0.0840        0.21

Timing Statistics Across 2 Ranks:
        Timer        Rank: Min(s)       Rank: Max(s)      Avg(s)    Stdev(s)
_____________________________________________________________________________
total                1:   40.8447       0:   40.8447     40.8447      0.0000
loop                 0:   40.3479       1:   40.3479     40.3479      0.0000
timestep             0:   40.3473       1:   40.3475     40.3474      0.0001
  position           1:    0.2376       0:    0.3202      0.2789      0.0413
  velocity           1:    0.4418       0:    0.5985      0.5201      0.0783
  redistribute       0:    4.7711       1:    4.9227      4.8469      0.0758
    atomHalo         1:    1.0296       0:    1.3479      1.1888      0.1592
  force              0:   34.8429       1:   34.9934     34.9182      0.0752
commHalo             1:    0.1729       0:    0.5154      0.3442      0.1713
commReduce           1:    0.0131       0:    0.0840      0.0485      0.0355

---------------------------------------------------
 Average atom update rate:       0.20 us/atom/task
---------------------------------------------------


---------------------------------------------------
 Average all atom update rate:   0.10 us/atom
---------------------------------------------------


---------------------------------------------------
 Average atom rate:              9.91 atoms/us
---------------------------------------------------

Wed Feb 21 16:56:33 2024: CoMD Ending


* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 124208)
* Warning: (host ins01.benchmarkcenter.megware.com, process 124208) Observed more threads (9) than expected (8): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=9.

* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 124209)
* Warning: (host ins01.benchmarkcenter.megware.com, process 124209) Observed more threads (9) than expected (8): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=9.


Your experiment path is /beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_3

To display your profiling results:
##################################################################################################################################################################################################
#    LEVEL    |     REPORT     |                                                                             COMMAND                                                                             #
##################################################################################################################################################################################################
#  Functions  |  Cluster-wide  |  maqao lprof -df xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_3      #
#  Functions  |  Per-node      |  maqao lprof -df -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_3  #
#  Functions  |  Per-process   |  maqao lprof -df -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_3  #
#  Functions  |  Per-thread    |  maqao lprof -df -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_3  #
#  Loops      |  Cluster-wide  |  maqao lprof -dl xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_3      #
#  Loops      |  Per-node      |  maqao lprof -dl -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_3  #
#  Loops      |  Per-process   |  maqao lprof -dl -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_3  #
#  Loops      |  Per-thread    |  maqao lprof -dl -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_3  #
##################################################################################################################################################################################################


* Info: Detected 2 Lprof instances in ins01.benchmarkcenter.megware.com: processes-per-node/ppn set accordingly.
If this is incorrect, rerun with an explicit value for this setting

* Info: Selecting the 'perf-high-ppn' engine for node ins01.benchmarkcenter.megware.com

* Info: "ref-cycles" not supported on ins01.benchmarkcenter.megware.com: fallback to "cpu-clock"
* Warning: Found no event able to derive walltime: prepending cpu-clock
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 124300)
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 124299)Wed Feb 21 16:56:44 2024: Starting Initialization


Mini-Application Name    : CoMD-openmp-mpi
Mini-Application Version : 1.1
Platform:
  hostname: gmz16.benchmarkcenter.megware.com
  kernel name: 'Linux'
  kernel release: '5.14.0-362.13.1.el9_3.x86_64'
  processor: 'x86_64'
Build:
  CC: '/cluster/intel/oneapi/2024.0.0/mpi/2021.11/bin/mpiicc'
  compiler version: 'unknown'
  CFLAGS: '-O3 -march=native -DDO_MPI -O3 -march=haswell -fno-tree-vectorize -fno-openmp-simd -funroll-loops -ffast-math -g -grecord-gcc-switches -fno-omit-frame-pointer -fcf-protection=none -no-pie -cc=gcc -fopenmp -funroll-loops'
  LDFLAGS: ' '
  using MPI: true
  Threading: OpenMP (16 threads) 
  Double Precision: true
Run Date/Time: 2024-02-21, 16:56:44

Command Line Parameters:
  doeam: 0
  potDir: pots
  potName: Cu_u6.eam
  potType: funcfl
  nx: 100
  ny: 100
  nz: 100
  xproc: 2
  yproc: 1
  zproc: 1
  Lattice constant: -1 Angstroms
  nSteps: 100
  printRate: 10
  Time step: 1 fs
  Initial Temperature: 600 K
  Initial Delta: 0 Angstroms

Simulation data: 
  Total atoms        : 4000000
  Min global bounds  : [   0.0000000000,   0.0000000000,   0.0000000000 ]
  Max global bounds  : [ 361.5000000000, 361.5000000000, 361.5000000000 ]

Decomposition data: 
  Processors         :      2,     1,     1
  Local boxes        :     31,    62,    62 =   119164
  Box size           : [   5.8306451613,   5.8306451613,   5.8306451613 ]
  Box factor         : [   1.0074548875,   1.0074548875,   1.0074548875 ] 
  Max Link Cell Occupancy: 32 of 64

Potential data: 
  Potential type   : Lennard-Jones
  Species name     : Cu
  Atomic number    : 29
  Mass             : 63.55 amu
  Lattice Type     : FCC
  Lattice spacing  : 3.615 Angstroms
  Cutoff           : 5.7875 Angstroms
  Epsilon          : 0.167 eV
  Sigma            : 2.315 Angstroms


Initial energy : -1.166063303487, atom count : 4000000 

Wed Feb 21 16:56:44 2024: Initialization Finished

Wed Feb 21 16:56:44 2024: Starting simulation

#                                                                                         Performance
#  Loop   Time(fs)       Total Energy   Potential Energy     Kinetic Energy  Temperature   (us/atom)     # Atoms
      0       0.00    -1.166063303487    -1.243619295087     0.077555991600     600.0000     0.0000      4000000
     10      10.00    -1.166059650500    -1.233157709949     0.067098059449     519.0938     0.0972      4000000
     20      20.00    -1.166048438416    -1.208183014318     0.042134575902     325.9677     0.1147      4000000
     30      30.00    -1.166037590737    -1.186586197151     0.020548606414     158.9711     0.1208      4000000
     40      40.00    -1.166042093134    -1.183625399859     0.017583306724     136.0305     0.1231      4000000
     50      50.00    -1.166051684893    -1.193713710257     0.027662025365     214.0030     0.1242      4000000
     60      60.00    -1.166054646931    -1.202662201513     0.036607554582     283.2087     0.1234      4000000
     70      70.00    -1.166052143011    -1.204911990844     0.038859847833     300.6332     0.1236      4000000
     80      80.00    -1.166048803912    -1.203635015020     0.037586211108     290.7799     0.1230      4000000
     90      90.00    -1.166048006780    -1.203820491599     0.037772484818     292.2210     0.1221      4000000
    100     100.00    -1.166049793504    -1.206862845060     0.040813051556     315.7439     0.1217      4000000
Wed Feb 21 16:57:08 2024: Ending simulation



Simulation Validation:
  Initial energy  : -1.166063303487
  Final energy    : -1.166049793504
  eFinal/eInitial : 0.999988
  Final atom count : 4000000, no atoms lost


Timings for Rank 0
        Timer        # Calls    Avg/Call (s)   Total (s)    % Loop
___________________________________________________________________
total                      1      24.3152       24.3152      101.84
loop                       1      23.8757       23.8757      100.00
timestep                  10       2.3875       23.8750      100.00
  position               100       0.0020        0.2041        0.85
  velocity               200       0.0018        0.3600        1.51
  redistribute           101       0.0470        4.7431       19.87
    atomHalo             101       0.0099        1.0025        4.20
  force                  101       0.1860       18.7837       78.67
commHalo                 303       0.0004        0.1152        0.48
commReduce                39       0.0000        0.0008        0.00

Timing Statistics Across 2 Ranks:
        Timer        Rank: Min(s)       Rank: Max(s)      Avg(s)    Stdev(s)
_____________________________________________________________________________
total                0:   24.3152       1:   24.3152     24.3152      0.0000
loop                 0:   23.8757       1:   23.8757     23.8757      0.0000
timestep             0:   23.8750       1:   23.8752     23.8751      0.0001
  position           1:    0.1646       0:    0.2041      0.1844      0.0197
  velocity           1:    0.3126       0:    0.3600      0.3363      0.0237
  redistribute       0:    4.7431       1:    5.5652      5.1541      0.4110
    atomHalo         0:    1.0025       1:    2.3530      1.6778      0.6752
  force              1:   17.9064       0:   18.7837     18.3451      0.4386
commHalo             0:    0.1152       1:    1.5185      0.8168      0.7016
commReduce           0:    0.0008       1:    0.1529      0.0768      0.0760

---------------------------------------------------
 Average atom update rate:       0.12 us/atom/task
---------------------------------------------------


---------------------------------------------------
 Average all atom update rate:   0.06 us/atom
---------------------------------------------------


---------------------------------------------------
 Average atom rate:             16.75 atoms/us
---------------------------------------------------

Wed Feb 21 16:57:08 2024: CoMD Ending


* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 124299)
* Warning: (host ins01.benchmarkcenter.megware.com, process 124299) Observed more threads (17) than expected (16): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=17.

* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 124300)
* Warning: (host ins01.benchmarkcenter.megware.com, process 124300) Observed more threads (17) than expected (16): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=17.


Your experiment path is /beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_4

To display your profiling results:
##################################################################################################################################################################################################
#    LEVEL    |     REPORT     |                                                                             COMMAND                                                                             #
##################################################################################################################################################################################################
#  Functions  |  Cluster-wide  |  maqao lprof -df xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_4      #
#  Functions  |  Per-node      |  maqao lprof -df -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_4  #
#  Functions  |  Per-process   |  maqao lprof -df -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_4  #
#  Functions  |  Per-thread    |  maqao lprof -df -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_4  #
#  Loops      |  Cluster-wide  |  maqao lprof -dl xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_4      #
#  Loops      |  Per-node      |  maqao lprof -dl -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_4  #
#  Loops      |  Per-process   |  maqao lprof -dl -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_4  #
#  Loops      |  Per-thread    |  maqao lprof -dl -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_4  #
##################################################################################################################################################################################################


* Info: Detected 2 Lprof instances in ins01.benchmarkcenter.megware.com: processes-per-node/ppn set accordingly.
If this is incorrect, rerun with an explicit value for this setting

* Info: Selecting the 'perf-high-ppn' engine for node ins01.benchmarkcenter.megware.com

* Info: "ref-cycles" not supported on ins01.benchmarkcenter.megware.com: fallback to "cpu-clock"
* Warning: Found no event able to derive walltime: prepending cpu-clock
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 124436)
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 124437)Wed Feb 21 16:57:20 2024: Starting Initialization


Mini-Application Name    : CoMD-openmp-mpi
Mini-Application Version : 1.1
Platform:
  hostname: gmz16.benchmarkcenter.megware.com
  kernel name: 'Linux'
  kernel release: '5.14.0-362.13.1.el9_3.x86_64'
  processor: 'x86_64'
Build:
  CC: '/cluster/intel/oneapi/2024.0.0/mpi/2021.11/bin/mpiicc'
  compiler version: 'unknown'
  CFLAGS: '-O3 -march=native -DDO_MPI -O3 -march=haswell -fno-tree-vectorize -fno-openmp-simd -funroll-loops -ffast-math -g -grecord-gcc-switches -fno-omit-frame-pointer -fcf-protection=none -no-pie -cc=gcc -fopenmp -funroll-loops'
  LDFLAGS: ' '
  using MPI: true
  Threading: OpenMP (32 threads) 
  Double Precision: true
Run Date/Time: 2024-02-21, 16:57:20

Command Line Parameters:
  doeam: 0
  potDir: pots
  potName: Cu_u6.eam
  potType: funcfl
  nx: 100
  ny: 100
  nz: 100
  xproc: 2
  yproc: 1
  zproc: 1
  Lattice constant: -1 Angstroms
  nSteps: 100
  printRate: 10
  Time step: 1 fs
  Initial Temperature: 600 K
  Initial Delta: 0 Angstroms

Simulation data: 
  Total atoms        : 4000000
  Min global bounds  : [   0.0000000000,   0.0000000000,   0.0000000000 ]
  Max global bounds  : [ 361.5000000000, 361.5000000000, 361.5000000000 ]

Decomposition data: 
  Processors         :      2,     1,     1
  Local boxes        :     31,    62,    62 =   119164
  Box size           : [   5.8306451613,   5.8306451613,   5.8306451613 ]
  Box factor         : [   1.0074548875,   1.0074548875,   1.0074548875 ] 
  Max Link Cell Occupancy: 32 of 64

Potential data: 
  Potential type   : Lennard-Jones
  Species name     : Cu
  Atomic number    : 29
  Mass             : 63.55 amu
  Lattice Type     : FCC
  Lattice spacing  : 3.615 Angstroms
  Cutoff           : 5.7875 Angstroms
  Epsilon          : 0.167 eV
  Sigma            : 2.315 Angstroms


Initial energy : -1.166063303522, atom count : 4000000 

Wed Feb 21 16:57:21 2024: Initialization Finished

Wed Feb 21 16:57:21 2024: Starting simulation

#                                                                                         Performance
#  Loop   Time(fs)       Total Energy   Potential Energy     Kinetic Energy  Temperature   (us/atom)     # Atoms
      0       0.00    -1.166063303522    -1.243619295122     0.077555991600     600.0000     0.0000      4000000
     10      10.00    -1.166059650500    -1.233157709949     0.067098059449     519.0938     0.0796      4000000
     20      20.00    -1.166048438416    -1.208183014318     0.042134575902     325.9677     0.0872      4000000
     30      30.00    -1.166037590737    -1.186586197151     0.020548606414     158.9711     0.0900      4000000
     40      40.00    -1.166042093134    -1.183625399859     0.017583306724     136.0305     0.0913      4000000
     50      50.00    -1.166051684893    -1.193713710258     0.027662025365     214.0030     0.0915      4000000
     60      60.00    -1.166054646931    -1.202662201513     0.036607554582     283.2087     0.0818      4000000
     70      70.00    -1.166052143011    -1.204911990844     0.038859847833     300.6332     0.0795      4000000
     80      80.00    -1.166048803912    -1.203635015020     0.037586211108     290.7799     0.0790      4000000
     90      90.00    -1.166048006780    -1.203820491599     0.037772484818     292.2210     0.0790      4000000
    100     100.00    -1.166049793504    -1.206862845060     0.040813051556     315.7439     0.0808      4000000
Wed Feb 21 16:57:37 2024: Ending simulation



Simulation Validation:
  Initial energy  : -1.166063303522
  Final energy    : -1.166049793504
  eFinal/eInitial : 0.999988
  Final atom count : 4000000, no atoms lost


Timings for Rank 0
        Timer        # Calls    Avg/Call (s)   Total (s)    % Loop
___________________________________________________________________
total                      1      17.1728       17.1728      102.25
loop                       1      16.7942       16.7942      100.00
timestep                  10       1.6793       16.7933      100.00
  position               100       0.0014        0.1359        0.81
  velocity               200       0.0013        0.2547        1.52
  redistribute           101       0.0491        4.9624       29.55
    atomHalo             101       0.0122        1.2341        7.35
  force                  101       0.1147       11.5889       69.01
commHalo                 303       0.0004        0.1161        0.69
commReduce                39       0.0000        0.0015        0.01

Timing Statistics Across 2 Ranks:
        Timer        Rank: Min(s)       Rank: Max(s)      Avg(s)    Stdev(s)
_____________________________________________________________________________
total                0:   17.1728       1:   17.1732     17.1730      0.0002
loop                 1:   16.7942       0:   16.7942     16.7942      0.0000
timestep             0:   16.7933       1:   16.7935     16.7934      0.0001
  position           1:    0.1104       0:    0.1359      0.1231      0.0128
  velocity           1:    0.1986       0:    0.2547      0.2267      0.0280
  redistribute       0:    4.9624       1:    6.0195      5.4909      0.5286
    atomHalo         0:    1.2341       1:    3.0750      2.1545      0.9205
  force              1:   10.4443       0:   11.5889     11.0166      0.5723
commHalo             0:    0.1161       1:    2.2107      1.1634      1.0473
commReduce           0:    0.0015       1:    0.1882      0.0949      0.0934

---------------------------------------------------
 Average atom update rate:       0.08 us/atom/task
---------------------------------------------------


---------------------------------------------------
 Average all atom update rate:   0.04 us/atom
---------------------------------------------------


---------------------------------------------------
 Average atom rate:             23.82 atoms/us
---------------------------------------------------

Wed Feb 21 16:57:37 2024: CoMD Ending


* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 124436)
* Warning: (host ins01.benchmarkcenter.megware.com, process 124436) Observed more threads (33) than expected (32): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=33.

* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 124437)
* Warning: (host ins01.benchmarkcenter.megware.com, process 124437) Observed more threads (33) than expected (32): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=33.


Your experiment path is /beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_5

To display your profiling results:
##################################################################################################################################################################################################
#    LEVEL    |     REPORT     |                                                                             COMMAND                                                                             #
##################################################################################################################################################################################################
#  Functions  |  Cluster-wide  |  maqao lprof -df xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_5      #
#  Functions  |  Per-node      |  maqao lprof -df -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_5  #
#  Functions  |  Per-process   |  maqao lprof -df -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_5  #
#  Functions  |  Per-thread    |  maqao lprof -df -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_5  #
#  Loops      |  Cluster-wide  |  maqao lprof -dl xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_5      #
#  Loops      |  Per-node      |  maqao lprof -dl -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_5  #
#  Loops      |  Per-process   |  maqao lprof -dl -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_5  #
#  Loops      |  Per-thread    |  maqao lprof -dl -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_5  #
##################################################################################################################################################################################################


* Info: Detected 2 Lprof instances in ins01.benchmarkcenter.megware.com: processes-per-node/ppn set accordingly.
If this is incorrect, rerun with an explicit value for this setting

* Info: Selecting the 'perf-high-ppn' engine for node ins01.benchmarkcenter.megware.com

* Info: "ref-cycles" not supported on ins01.benchmarkcenter.megware.com: fallback to "cpu-clock"
* Warning: Found no event able to derive walltime: prepending cpu-clock
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 124612)
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 124613)Wed Feb 21 16:57:48 2024: Starting Initialization


Mini-Application Name    : CoMD-openmp-mpi
Mini-Application Version : 1.1
Platform:
  hostname: gmz16.benchmarkcenter.megware.com
  kernel name: 'Linux'
  kernel release: '5.14.0-362.13.1.el9_3.x86_64'
  processor: 'x86_64'
Build:
  CC: '/cluster/intel/oneapi/2024.0.0/mpi/2021.11/bin/mpiicc'
  compiler version: 'unknown'
  CFLAGS: '-O3 -march=native -DDO_MPI -O3 -march=haswell -fno-tree-vectorize -fno-openmp-simd -funroll-loops -ffast-math -g -grecord-gcc-switches -fno-omit-frame-pointer -fcf-protection=none -no-pie -cc=gcc -fopenmp -funroll-loops'
  LDFLAGS: ' '
  using MPI: true
  Threading: OpenMP (64 threads) 
  Double Precision: true
Run Date/Time: 2024-02-21, 16:57:48

Command Line Parameters:
  doeam: 0
  potDir: pots
  potName: Cu_u6.eam
  potType: funcfl
  nx: 100
  ny: 100
  nz: 100
  xproc: 2
  yproc: 1
  zproc: 1
  Lattice constant: -1 Angstroms
  nSteps: 100
  printRate: 10
  Time step: 1 fs
  Initial Temperature: 600 K
  Initial Delta: 0 Angstroms

Simulation data: 
  Total atoms        : 4000000
  Min global bounds  : [   0.0000000000,   0.0000000000,   0.0000000000 ]
  Max global bounds  : [ 361.5000000000, 361.5000000000, 361.5000000000 ]

Decomposition data: 
  Processors         :      2,     1,     1
  Local boxes        :     31,    62,    62 =   119164
  Box size           : [   5.8306451613,   5.8306451613,   5.8306451613 ]
  Box factor         : [   1.0074548875,   1.0074548875,   1.0074548875 ] 
  Max Link Cell Occupancy: 32 of 64

Potential data: 
  Potential type   : Lennard-Jones
  Species name     : Cu
  Atomic number    : 29
  Mass             : 63.55 amu
  Lattice Type     : FCC
  Lattice spacing  : 3.615 Angstroms
  Cutoff           : 5.7875 Angstroms
  Epsilon          : 0.167 eV
  Sigma            : 2.315 Angstroms


Initial energy : -1.166063303459, atom count : 4000000 

Wed Feb 21 16:57:49 2024: Initialization Finished

Wed Feb 21 16:57:49 2024: Starting simulation

#                                                                                         Performance
#  Loop   Time(fs)       Total Energy   Potential Energy     Kinetic Energy  Temperature   (us/atom)     # Atoms
      0       0.00    -1.166063303459    -1.243619295059     0.077555991600     600.0000     0.0000      4000000
     10      10.00    -1.166059650500    -1.233157709949     0.067098059449     519.0938     0.0685      4000000
     20      20.00    -1.166048438416    -1.208183014318     0.042134575902     325.9677     0.0655      4000000
     30      30.00    -1.166037590737    -1.186586197151     0.020548606414     158.9711     0.0652      4000000
     40      40.00    -1.166042093134    -1.183625399859     0.017583306724     136.0305     0.0659      4000000
     50      50.00    -1.166051684893    -1.193713710258     0.027662025365     214.0030     0.0665      4000000
     60      60.00    -1.166054646931    -1.202662201513     0.036607554582     283.2087     0.0665      4000000
     70      70.00    -1.166052143011    -1.204911990844     0.038859847833     300.6332     0.0664      4000000
     80      80.00    -1.166048803912    -1.203635015020     0.037586211108     290.7799     0.0663      4000000
     90      90.00    -1.166048006780    -1.203820491599     0.037772484818     292.2210     0.0661      4000000
    100     100.00    -1.166049793504    -1.206862845060     0.040813051556     315.7439     0.0660      4000000
Wed Feb 21 16:58:02 2024: Ending simulation



Simulation Validation:
  Initial energy  : -1.166063303459
  Final energy    : -1.166049793504
  eFinal/eInitial : 0.999988
  Final atom count : 4000000, no atoms lost


Timings for Rank 0
        Timer        # Calls    Avg/Call (s)   Total (s)    % Loop
___________________________________________________________________
total                      1      13.6531       13.6531      102.98
loop                       1      13.2586       13.2586      100.00
timestep                  10       1.3256       13.2565       99.98
  position               100       0.0020        0.1995        1.50
  velocity               200       0.0016        0.3283        2.48
  redistribute           101       0.0526        5.3103       40.05
    atomHalo             101       0.0118        1.1905        8.98
  force                  101       0.0746        7.5381       56.85
commHalo                 303       0.0004        0.1363        1.03
commReduce                39       0.0000        0.0012        0.01

Timing Statistics Across 2 Ranks:
        Timer        Rank: Min(s)       Rank: Max(s)      Avg(s)    Stdev(s)
_____________________________________________________________________________
total                0:   13.6531       1:   13.6534     13.6532      0.0001
loop                 0:   13.2586       1:   13.2586     13.2586      0.0000
timestep             0:   13.2565       1:   13.2567     13.2566      0.0001
  position           1:    0.1132       0:    0.1995      0.1563      0.0432
  velocity           1:    0.2772       0:    0.3283      0.3027      0.0255
  redistribute       0:    5.3103       1:    5.7273      5.5188      0.2085
    atomHalo         0:    1.1905       1:    2.8077      1.9991      0.8086
  force              1:    7.1949       0:    7.5381      7.3665      0.1716
commHalo             0:    0.1363       1:    1.9458      1.0411      0.9047
commReduce           0:    0.0012       1:    0.0818      0.0415      0.0403

---------------------------------------------------
 Average atom update rate:       0.07 us/atom/task
---------------------------------------------------


---------------------------------------------------
 Average all atom update rate:   0.03 us/atom
---------------------------------------------------


---------------------------------------------------
 Average atom rate:             30.17 atoms/us
---------------------------------------------------

Wed Feb 21 16:58:02 2024: CoMD Ending


* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 124612)
* Warning: (host ins01.benchmarkcenter.megware.com, process 124612) Observed more threads (65) than expected (64): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=65.

* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 124613)
* Warning: (host ins01.benchmarkcenter.megware.com, process 124613) Observed more threads (65) than expected (64): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=65.


Your experiment path is /beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_6

To display your profiling results:
##################################################################################################################################################################################################
#    LEVEL    |     REPORT     |                                                                             COMMAND                                                                             #
##################################################################################################################################################################################################
#  Functions  |  Cluster-wide  |  maqao lprof -df xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_6      #
#  Functions  |  Per-node      |  maqao lprof -df -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_6  #
#  Functions  |  Per-process   |  maqao lprof -df -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_6  #
#  Functions  |  Per-thread    |  maqao lprof -df -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_6  #
#  Loops      |  Cluster-wide  |  maqao lprof -dl xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_6      #
#  Loops      |  Per-node      |  maqao lprof -dl -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_6  #
#  Loops      |  Per-process   |  maqao lprof -dl -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_6  #
#  Loops      |  Per-thread    |  maqao lprof -dl -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_6  #
##################################################################################################################################################################################################


* Info: Detected 2 Lprof instances in ins01.benchmarkcenter.megware.com: processes-per-node/ppn set accordingly.
If this is incorrect, rerun with an explicit value for this setting

* Info: Selecting the 'perf-high-ppn' engine for node ins01.benchmarkcenter.megware.com

* Info: "ref-cycles" not supported on ins01.benchmarkcenter.megware.com: fallback to "cpu-clock"
* Warning: Found no event able to derive walltime: prepending cpu-clock
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 124917)
* Info: Process launched (host ins01.benchmarkcenter.megware.com, process 124918)Wed Feb 21 16:58:14 2024: Starting Initialization


Mini-Application Name    : CoMD-openmp-mpi
Mini-Application Version : 1.1
Platform:
  hostname: gmz16.benchmarkcenter.megware.com
  kernel name: 'Linux'
  kernel release: '5.14.0-362.13.1.el9_3.x86_64'
  processor: 'x86_64'
Build:
  CC: '/cluster/intel/oneapi/2024.0.0/mpi/2021.11/bin/mpiicc'
  compiler version: 'unknown'
  CFLAGS: '-O3 -march=native -DDO_MPI -O3 -march=haswell -fno-tree-vectorize -fno-openmp-simd -funroll-loops -ffast-math -g -grecord-gcc-switches -fno-omit-frame-pointer -fcf-protection=none -no-pie -cc=gcc -fopenmp -funroll-loops'
  LDFLAGS: ' '
  using MPI: true
  Threading: OpenMP (96 threads) 
  Double Precision: true
Run Date/Time: 2024-02-21, 16:58:14

Command Line Parameters:
  doeam: 0
  potDir: pots
  potName: Cu_u6.eam
  potType: funcfl
  nx: 100
  ny: 100
  nz: 100
  xproc: 2
  yproc: 1
  zproc: 1
  Lattice constant: -1 Angstroms
  nSteps: 100
  printRate: 10
  Time step: 1 fs
  Initial Temperature: 600 K
  Initial Delta: 0 Angstroms

Simulation data: 
  Total atoms        : 4000000
  Min global bounds  : [   0.0000000000,   0.0000000000,   0.0000000000 ]
  Max global bounds  : [ 361.5000000000, 361.5000000000, 361.5000000000 ]

Decomposition data: 
  Processors         :      2,     1,     1
  Local boxes        :     31,    62,    62 =   119164
  Box size           : [   5.8306451613,   5.8306451613,   5.8306451613 ]
  Box factor         : [   1.0074548875,   1.0074548875,   1.0074548875 ] 
  Max Link Cell Occupancy: 32 of 64

Potential data: 
  Potential type   : Lennard-Jones
  Species name     : Cu
  Atomic number    : 29
  Mass             : 63.55 amu
  Lattice Type     : FCC
  Lattice spacing  : 3.615 Angstroms
  Cutoff           : 5.7875 Angstroms
  Epsilon          : 0.167 eV
  Sigma            : 2.315 Angstroms


Initial energy : -1.166063303456, atom count : 4000000 

Wed Feb 21 16:58:15 2024: Initialization Finished

Wed Feb 21 16:58:15 2024: Starting simulation

#                                                                                         Performance
#  Loop   Time(fs)       Total Energy   Potential Energy     Kinetic Energy  Temperature   (us/atom)     # Atoms
      0       0.00    -1.166063303456    -1.243619295056     0.077555991600     600.0000     0.0000      4000000
     10      10.00    -1.166059650500    -1.233157709949     0.067098059449     519.0938     0.0588      4000000
     20      20.00    -1.166048438416    -1.208183014318     0.042134575902     325.9677     0.0572      4000000
     30      30.00    -1.166037590737    -1.186586197151     0.020548606414     158.9711     0.0575      4000000
     40      40.00    -1.166042093134    -1.183625399859     0.017583306724     136.0305     0.0587      4000000
     50      50.00    -1.166051684893    -1.193713710258     0.027662025365     214.0030     0.0579      4000000
     60      60.00    -1.166054646931    -1.202662201513     0.036607554582     283.2087     0.0587      4000000
     70      70.00    -1.166052143011    -1.204911990844     0.038859847833     300.6332     0.0637      4000000
     80      80.00    -1.166048803912    -1.203635015020     0.037586211108     290.7799     0.0621      4000000
     90      90.00    -1.166048006780    -1.203820491599     0.037772484818     292.2210     0.0606      4000000
    100     100.00    -1.166049793504    -1.206862845060     0.040813051556     315.7439     0.0634      4000000
Wed Feb 21 16:58:27 2024: Ending simulation



Simulation Validation:
  Initial energy  : -1.166063303456
  Final energy    : -1.166049793504
  eFinal/eInitial : 0.999988
  Final atom count : 4000000, no atoms lost


Timings for Rank 0
        Timer        # Calls    Avg/Call (s)   Total (s)    % Loop
___________________________________________________________________
total                      1      12.4030       12.4030      103.59
loop                       1      11.9736       11.9736      100.00
timestep                  10       1.1972       11.9716       99.98
  position               100       0.0013        0.1350        1.13
  velocity               200       0.0012        0.2307        1.93
  redistribute           101       0.0601        6.0693       50.69
    atomHalo             101       0.0161        1.6250       13.57
  force                  101       0.0544        5.4962       45.90
commHalo                 303       0.0017        0.5221        4.36
commReduce                39       0.0037        0.1428        1.19

Timing Statistics Across 2 Ranks:
        Timer        Rank: Min(s)       Rank: Max(s)      Avg(s)    Stdev(s)
_____________________________________________________________________________
total                0:   12.4030       1:   12.4032     12.4031      0.0001
loop                 0:   11.9736       1:   11.9736     11.9736      0.0000
timestep             0:   11.9716       1:   11.9726     11.9721      0.0005
  position           0:    0.1350       1:    0.2377      0.1863      0.0514
  velocity           0:    0.2307       1:    0.6796      0.4551      0.2245
  redistribute       1:    5.6048       0:    6.0693      5.8370      0.2323
    atomHalo         0:    1.6250       1:    2.6720      2.1485      0.5235
  force              1:    5.4676       0:    5.4962      5.4819      0.0143
commHalo             0:    0.5221       1:    1.7976      1.1599      0.6378
commReduce           1:    0.0637       0:    0.1428      0.1032      0.0396

---------------------------------------------------
 Average atom update rate:       0.06 us/atom/task
---------------------------------------------------


---------------------------------------------------
 Average all atom update rate:   0.03 us/atom
---------------------------------------------------


---------------------------------------------------
 Average atom rate:             33.41 atoms/us
---------------------------------------------------

Wed Feb 21 16:58:27 2024: CoMD Ending


* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 124917)
* Warning: (host ins01.benchmarkcenter.megware.com, process 124917) Observed more threads (97) than expected (96): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=97.

* Info: Process finished (host ins01.benchmarkcenter.megware.com, process 124918)
* Warning: (host ins01.benchmarkcenter.megware.com, process 124918) Observed more threads (97) than expected (96): in case of high IO overhead or suspicious profile, rerun with maximum-threads-per-process=97.


Your experiment path is /beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_7

To display your profiling results:
##################################################################################################################################################################################################
#    LEVEL    |     REPORT     |                                                                             COMMAND                                                                             #
##################################################################################################################################################################################################
#  Functions  |  Cluster-wide  |  maqao lprof -df xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_7      #
#  Functions  |  Per-node      |  maqao lprof -df -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_7  #
#  Functions  |  Per-process   |  maqao lprof -df -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_7  #
#  Functions  |  Per-thread    |  maqao lprof -df -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_7  #
#  Loops      |  Cluster-wide  |  maqao lprof -dl xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_7      #
#  Loops      |  Per-node      |  maqao lprof -dl -dn xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_7  #
#  Loops      |  Per-process   |  maqao lprof -dl -dp xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_7  #
#  Loops      |  Per-thread    |  maqao lprof -dl -dt xp=/beegfs/hackathon/users/eoseret/qaas_runs/CoMD/intel/CoMD/run/oneview_runs/compilers/gcc_4/oneview_results_scal/tools/lprof_npsu_run_7  #
##################################################################################################################################################################################################

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