Function: MPI_Isend | Module: libmpi.so.12.0.0 | Source: :0-0 | Coverage (incl. loops): 0.03% | (excl. loops): 0.03% |
---|
Function: MPI_Isend | Module: libmpi.so.12.0.0 | Source: :0-0 | Coverage (incl. loops): 0.03% | (excl. loops): 0.03% |
---|
*** This Panel is Intentionally Left Blank. *** It is due to a lack of debug symbols in the given object |
Coverage (%) | Name | Source Location | Module |
---|
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►11.11+ | dd_move_x_specat(gmx_domdec_t [...] | domdec_specatomcomm.cpp:275 | libgromacs_mpi.so.9.0.0 |
○ | dd_move_x_constraints(gmx_domd[...] | domdec_constraints.cpp:86 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Constraints::Impl::apply([...] | constr.cpp:493 | libgromacs_mpi.so.9.0.0 |
○ | gmx::constrain_coordinates(gmx[...] | constr.cpp:373 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1660 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 | |
►5.56+ | dd_move_x_specat(gmx_domdec_t [...] | domdec_specatomcomm.cpp:275 | libgromacs_mpi.so.9.0.0 |
○ | dd_move_x_constraints(gmx_domd[...] | domdec_constraints.cpp:86 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Constraints::Impl::apply([...] | constr.cpp:493 | libgromacs_mpi.so.9.0.0 |
○ | gmx::constrain_coordinates(gmx[...] | constr.cpp:373 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1660 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
►5.56+ | dd_move_x_specat(gmx_domdec_t [...] | domdec_specatomcomm.cpp:275 | libgromacs_mpi.so.9.0.0 |
○ | dd_move_x_constraints(gmx_domd[...] | domdec_constraints.cpp:86 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Constraints::Impl::apply([...] | constr.cpp:493 | libgromacs_mpi.so.9.0.0 |
○ | gmx::constrain_coordinates(gmx[...] | constr.cpp:373 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1660 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►11.11+ | dd_move_x_specat(gmx_domdec_t [...] | domdec_specatomcomm.cpp:275 | libgromacs_mpi.so.9.0.0 |
○ | dd_move_x_constraints(gmx_domd[...] | domdec_constraints.cpp:86 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Constraints::Impl::apply([...] | constr.cpp:493 | libgromacs_mpi.so.9.0.0 |
○ | gmx::constrain_coordinates(gmx[...] | constr.cpp:373 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1660 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►12.50+ | dd_move_x_specat(gmx_domdec_t [...] | domdec_specatomcomm.cpp:275 | libgromacs_mpi.so.9.0.0 |
○ | dd_move_x_constraints(gmx_domd[...] | domdec_constraints.cpp:86 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Constraints::Impl::apply([...] | constr.cpp:493 | libgromacs_mpi.so.9.0.0 |
○ | gmx::constrain_coordinates(gmx[...] | constr.cpp:373 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1660 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 | |
►12.50+ | gmx::Mdrunner::mdrunner() | runner.cpp:2330 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►2.78+ | dd_move_x_specat(gmx_domdec_t [...] | domdec_specatomcomm.cpp:267 | libgromacs_mpi.so.9.0.0 |
○ | dd_move_x_constraints(gmx_domd[...] | domdec_constraints.cpp:86 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined..37 | lincs.cpp:1185 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | gmx::constrain_lincs(bool, t_i[...] | lincs.cpp:2534 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Constraints::Impl::apply([...] | constr.cpp:512 | libgromacs_mpi.so.9.0.0 |
○ | gmx::constrain_coordinates(gmx[...] | constr.cpp:373 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1660 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►14.00+ | dd_move_x_specat(gmx_domdec_t [...] | domdec_specatomcomm.cpp:275 | libgromacs_mpi.so.9.0.0 |
○ | dd_move_x_constraints(gmx_domd[...] | domdec_constraints.cpp:86 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Constraints::Impl::apply([...] | constr.cpp:493 | libgromacs_mpi.so.9.0.0 |
○ | gmx::constrain_coordinates(gmx[...] | constr.cpp:373 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1660 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 | |
►14.00+ | dd_move_x_specat(gmx_domdec_t [...] | domdec_specatomcomm.cpp:267 | libgromacs_mpi.so.9.0.0 |
○ | dd_move_x_constraints(gmx_domd[...] | domdec_constraints.cpp:86 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined..37 | lincs.cpp:1185 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | gmx::constrain_lincs(bool, t_i[...] | lincs.cpp:2534 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Constraints::Impl::apply([...] | constr.cpp:512 | libgromacs_mpi.so.9.0.0 |
○ | gmx::constrain_coordinates(gmx[...] | constr.cpp:373 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1660 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 | |
►3.00+ | dd_move_x_specat(gmx_domdec_t [...] | domdec_specatomcomm.cpp:275 | libgromacs_mpi.so.9.0.0 |
○ | dd_move_x_constraints(gmx_domd[...] | domdec_constraints.cpp:86 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Constraints::Impl::apply([...] | constr.cpp:493 | libgromacs_mpi.so.9.0.0 |
○ | gmx::constrain_coordinates(gmx[...] | constr.cpp:373 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1660 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
►2.00+ | gmx_pme_send_coordinates(t_for[...] | wallcycle.h:464 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:1601 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 | |
►2.00+ | gmx::Mdrunner::mdrunner() | runner.cpp:2330 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
►1.00+ | gmx::Mdrunner::mdrunner() | runner.cpp:2330 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 | |
○1.00 | gmx::Mdrunner::mdrunner() | runner.cpp:2330 | libgromacs_mpi.so.9.0.0 |
►1.00+ | dd_move_x_specat(gmx_domdec_t [...] | domdec_specatomcomm.cpp:275 | libgromacs_mpi.so.9.0.0 |
○ | dd_move_x_constraints(gmx_domd[...] | domdec_constraints.cpp:86 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Constraints::Impl::apply([...] | constr.cpp:493 | libgromacs_mpi.so.9.0.0 |
○ | gmx::constrain_coordinates(gmx[...] | constr.cpp:373 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1660 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►12.93+ | dd_move_x_specat(gmx_domdec_t [...] | domdec_specatomcomm.cpp:267 | libgromacs_mpi.so.9.0.0 |
○ | dd_move_x_constraints(gmx_domd[...] | domdec_constraints.cpp:86 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined..37 | lincs.cpp:1185 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | gmx::constrain_lincs(bool, t_i[...] | lincs.cpp:2534 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Constraints::Impl::apply([...] | constr.cpp:512 | libgromacs_mpi.so.9.0.0 |
○ | gmx::constrain_coordinates(gmx[...] | constr.cpp:373 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1660 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 | |
►12.24+ | dd_move_x_specat(gmx_domdec_t [...] | domdec_specatomcomm.cpp:275 | libgromacs_mpi.so.9.0.0 |
○ | dd_move_x_constraints(gmx_domd[...] | domdec_constraints.cpp:86 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Constraints::Impl::apply([...] | constr.cpp:493 | libgromacs_mpi.so.9.0.0 |
○ | gmx::constrain_coordinates(gmx[...] | constr.cpp:373 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1660 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 |
Path / |
Source file and lines | |
Module | libmpi.so.12.0.0 |
Run 1x1 | Number processes: 1Number processes per node: 1OMP_NUM_THREADS: 1 |
---|---|
Run 2x1 | Number processes: 2Number processes per node: 2OMP_NUM_THREADS: 1 |
Run 4x1 | Number processes: 4Number processes per node: 4OMP_NUM_THREADS: 1 |
Run 8x1 | Number processes: 8Number processes per node: 8OMP_NUM_THREADS: 1 |
Run 16x1 | Number processes: 16Number processes per node: 16OMP_NUM_THREADS: 1 |
Run 32x1 | Number processes: 32Number processes per node: 32OMP_NUM_THREADS: 1 |
Run 64x1 | Number processes: 64Number processes per node: 64OMP_NUM_THREADS: 1 |
Run 128x1 | Number processes: 128Number processes per node: 128OMP_NUM_THREADS: 1 |
Run 192x1 | Number processes: 192Number nodes: 1Number processes per node: 192Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 -pin on -deffnm aoccMPI Command: mpirun -genv I_MPI_FABRICS=shm -n <number_processes>Dataset: Run Directory: .OMP_NUM_THREADS: 1 |
(1x1) Efficiency | (1x1) Potential Speed-Up (%) | (2x1) Efficiency | (2x1) Potential Speed-Up (%) | (4x1) Efficiency | (4x1) Potential Speed-Up (%) | (8x1) Efficiency | (8x1) Potential Speed-Up (%) | (16x1) Efficiency | (16x1) Potential Speed-Up (%) | (32x1) Efficiency | (32x1) Potential Speed-Up (%) | (64x1) Efficiency | (64x1) Potential Speed-Up (%) | (128x1) Efficiency | (128x1) Potential Speed-Up (%) | (192x1) Efficiency | (192x1) Potential Speed-Up (%) |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
Run | Number of threads | Efficiency (ideal is 1) | Speedup | Ideal Speedup | Time (s) | Coverage (%) |
---|---|---|---|---|---|---|
1x1 | ||||||
2x1 | ||||||
4x1 | 2 | 1 | 1 | 4 | 0.0050000003539026 | 0.0010041188215837 |
8x1 | 7 | 1 | 1 | 8 | 0.034999996423721 | 0.0072736768051982 |
16x1 | 7 | 1 | 1 | 16 | 0.0099999997764826 | 0.0034158776979893 |
32x1 | 10 | 1 | 1 | 32 | 0.019999995827675 | 0.0048700626939535 |
64x1 | 25 | 1 | 1 | 64 | 0.014999996870756 | 0.0071007632650435 |
128x1 | 66 | 1 | 1 | 128 | 0.01999999769032 | 0.023315185680985 |
192x1 | 100 | 1 | 1 | 192 | 0.024999994784594 | 0.028709042817354 |
Name | Coverage (%) | Time (s) |
---|---|---|
○MPI_Isend | 0.03 | 0.00 |