(1x1) Efficiency | (1x1) Potential Speed-Up (%) | (2x1) Efficiency | (2x1) Potential Speed-Up (%) | (4x1) Efficiency | (4x1) Potential Speed-Up (%) | (8x1) Efficiency | (8x1) Potential Speed-Up (%) | (16x1) Efficiency | (16x1) Potential Speed-Up (%) | (32x1) Efficiency | (32x1) Potential Speed-Up (%) | (64x1) Efficiency | (64x1) Potential Speed-Up (%) | (128x1) Efficiency | (128x1) Potential Speed-Up (%) | (192x1) Efficiency | (192x1) Potential Speed-Up (%) |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
Run | Number of threads | Efficiency (ideal is 1) | Speedup | Ideal Speedup | Time (s) | Coverage (%) |
---|---|---|---|---|---|---|
1x1 | ||||||
2x1 | 2 | 1 | 1 | 2 | 0.0099999997764826 | 0.0022062016651034 |
4x1 | 4 | 1 | 1 | 4 | 0.014999998733401 | 0.0045184255577624 |
8x1 | 6 | 1 | 1 | 8 | 0.019999999552965 | 0.0060614249669015 |
16x1 | 13 | 1 | 1 | 16 | 0.01999999769032 | 0.0083499131724238 |
32x1 | 16 | 1 | 1 | 32 | 0.00999999884516 | 0.0054789893329144 |
64x1 | 20 | 1 | 1 | 64 | 0.014999997802079 | 0.0053256032988429 |
128x1 | 46 | 1 | 1 | 128 | 0.02000000141561 | 0.015388254076242 |
192x1 | 69 | 1 | 1 | 192 | 0.01999999769032 | 0.01816270314157 |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►6.67 | minCellSizeForAtomDisplacement[...] | calc_verletbuf.cpp:1798 | libgromacs_mpi.so.9.0.0 |
○ | gmx::DomainDecompositionBuilde[...] | domdec.cpp:1954 | libgromacs_mpi.so.9.0.0 |
○ | gmx::DomainDecompositionBuilde[...] | domdec.cpp:3003 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | unique_ptr.h:962 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►4.55 | calcVerletBufferSize(gmx_mtop_[...] | calc_verletbuf.cpp:1396 | libgromacs_mpi.so.9.0.0 |
○ | setupDynamicPairlistPruning(gm[...] | pairlist_tuning.cpp:555 | libgromacs_mpi.so.9.0.0 |
○ | Nbnxm::init_nb_verlet(gmx::MDL[...] | nbnxm_setup.cpp:431 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:1859 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►5.56 | calcVerletBufferSize(gmx_mtop_[...] | calc_verletbuf.cpp:1396 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:573 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►1.08 | calcVerletBufferSize(gmx_mtop_[...] | calc_verletbuf.cpp:1396 | libgromacs_mpi.so.9.0.0 |
○ | setupDynamicPairlistPruning(gm[...] | pairlist_tuning.cpp:555 | libgromacs_mpi.so.9.0.0 |
○ | Nbnxm::init_nb_verlet(gmx::MDL[...] | nbnxm_setup.cpp:431 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:1859 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 | |
►1.08 | gmx::dd_partition_system(_IO_F[...] | partition.cpp:3287 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1001 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 |